RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 C11orf16Q9NQ32 467 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 SPG21Q9NZD8 308 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 CD207Q9UJ71 328 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 BARX2Q9UMQ3 279 aaPredicted RBP10.06□□□□□ -0.8
IDH3A-217ENST00000559889 GOLGA6L6A8MZA4 724 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 NT5C1B-RDH14C9J2C7 533 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 PI4K2BG5E9Z4 385 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 TSPAN1O60635 241 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 GLRA2P23416 452 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 POU5F1BQ06416 359 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 COASYQ13057 564 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 ORC2Q13416 577 aaPredicted RBP10.05□□□□□ -0.8
IDH3A-217ENST00000559889 SMAD4Q13485 552 aaKnown RBP10.05□□□□□ -0.8
IDH3A-217ENST00000559889 AMHR2Q16671 573 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 USP49Q70CQ1 688 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 ADHFE1Q8IWW8 467 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 RSPH1Q8WYR4 309 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 TIGD1Q96MW7 591 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 TCF25Q9BQ70 676 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 C1QTNF1Q9BXJ1 281 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 TUFT1Q9NNX1 390 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 TBC1D13Q9NVG8 400 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 PRKAG3Q9UGI9 489 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 SRPRBQ9Y5M8 271 aaKnown RBP10.05□□□□□ -0.8
IDH3A-217ENST00000559889 WDFY4Q6ZS81 3184 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 OR52Z1P0C646 297 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 MBTD1Q05BQ5 628 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 NOMO2Q5JPE7 1267 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 TTC38Q5R3I4 469 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 PLPP4Q5VZY2 271 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 GLB1LQ6UWU2 654 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 KRBA2Q6ZNG9 492 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 DHX40Q8IX18 779 aaKnown RBP10.05□□□□□ -0.8
IDH3A-217ENST00000559889 BCL7CQ8WUZ0 217 aaPredicted RBP10.05□□□□□ -0.8
IDH3A-217ENST00000559889 CDCA3Q99618 268 aaPredicted RBP10.05□□□□□ -0.8
IDH3A-217ENST00000559889 POLR3CQ9BUI4 534 aaPredicted RBP10.05□□□□□ -0.8
IDH3A-217ENST00000559889 NRDE2Q9H7Z3 1164 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 GPRC5CQ9NQ84 441 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 PUF60Q9UHX1 559 aaKnown RBP10.05□□□□□ -0.8
IDH3A-217ENST00000559889 FAM50BQ9Y247 325 aa10.05□□□□□ -0.8
IDH3A-217ENST00000559889 VWA3AA6NCI4 1184 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 RPA1P27694 616 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 SSTR3P32745 418 aaPredicted RBP10.04□□□□□ -0.8
IDH3A-217ENST00000559889 TRAPPC10P48553 1259 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 ALDH7A1P49419 539 aaKnown RBP10.04□□□□□ -0.8
IDH3A-217ENST00000559889 KRT17Q04695 432 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 PTGDRQ13258 359 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 PCBP1Q15365 356 aaKnown RBP eCLIP10.04□□□□□ -0.8
IDH3A-217ENST00000559889 TMEM184AQ6ZMB5 413 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 ZNF280BQ86YH2 543 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 MRPL43Q8N983 215 aaKnown RBP10.04□□□□□ -0.8
IDH3A-217ENST00000559889 SMG8Q8ND04 991 aaKnown RBP10.04□□□□□ -0.8
IDH3A-217ENST00000559889 EIF2AQ9BY44 585 aaKnown RBP10.04□□□□□ -0.8
IDH3A-217ENST00000559889 NFKBIZQ9BYH8 718 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 NGRNQ9NPE2 291 aaKnown RBP10.04□□□□□ -0.8
IDH3A-217ENST00000559889 DNAJB4Q9UDY4 337 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 DBR1Q9UK59 544 aaKnown RBP10.04□□□□□ -0.8
IDH3A-217ENST00000559889 INPP5FQ9Y2H2 1132 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 USO1O60763 962 aaKnown RBP10.04□□□□□ -0.8
IDH3A-217ENST00000559889 ZC3H11AO75152 810 aaKnown RBP eCLIP10.04□□□□□ -0.8
IDH3A-217ENST00000559889 GALTP07902 379 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 COL9A1P20849 921 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 ZNF75DP51815 510 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 NLRP12P59046 1061 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 ECM1Q16610 540 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 POTEGQ6S5H5 508 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 TMC7Q7Z402 723 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 PGBD4Q96DM1 585 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 EPSTI1Q96J88 318 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 ENTPD7Q9NQZ7 604 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 SERTAD1Q9UHV2 236 aa10.04□□□□□ -0.8
IDH3A-217ENST00000559889 HOOK1Q9UJC3 728 aaKnown RBP10.04□□□□□ -0.8
IDH3A-217ENST00000559889 C2orf71A6NGG8 1288 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 INO80B-WBP1J3KQ70 363 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 B4GALT5O43286 388 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 DDHD2O94830 711 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 ARF4P18085 180 aaPredicted RBP10.03□□□□□ -0.8
IDH3A-217ENST00000559889 AXLP30530 894 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 TFDP1Q14186 410 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 GRAMD1CQ8IYS0 662 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 DHX58Q96C10 678 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 IGSF21Q96ID5 467 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 CPB2Q96IY4 423 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 NACC1Q96RE7 527 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 VN1R3Q9BXE9 311 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 POLR3FQ9H1D9 316 aaPredicted RBP10.03□□□□□ -0.8
IDH3A-217ENST00000559889 RSAD1Q9HA92 442 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 RAPGEFL1Q9UHV5 662 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 PCDHA5Q9Y5H7 936 aa10.03□□□□□ -0.8
IDH3A-217ENST00000559889 FAM237AA0A1B0GTK4 181 aa10.02□□□□□ -0.8
IDH3A-217ENST00000559889 ERLIN2O94905 339 aa10.02□□□□□ -0.8
IDH3A-217ENST00000559889 SLC11A1P49279 550 aa10.02□□□□□ -0.8
IDH3A-217ENST00000559889 FXR2P51116 673 aaKnown RBP eCLIP10.02□□□□□ -0.8
IDH3A-217ENST00000559889 MAEAQ7L5Y9 396 aa10.02□□□□□ -0.8
IDH3A-217ENST00000559889 NAP1L5Q96NT1 182 aaPredicted RBP10.02□□□□□ -0.8
IDH3A-217ENST00000559889 LRFN3Q9BTN0 628 aa10.02□□□□□ -0.8
IDH3A-217ENST00000559889 ZBP1Q9H171 429 aa10.02□□□□□ -0.8
IDH3A-217ENST00000559889 S1PR5Q9H228 398 aa10.02□□□□□ -0.8
IDH3A-217ENST00000559889 USP15Q9Y4E8 981 aaPredicted RBP10.02□□□□□ -0.8
IDH3A-217ENST00000559889 HES2Q9Y543 173 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms