RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 KIAA1211LQ6NV74 962 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 C19orf48Q6RUI8 117 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 NIPA1Q7RTP0 329 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 RHPN2Q8IUC4 686 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 COLGALT2Q8IYK4 626 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 RNF168Q8IYW5 571 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-211ENST00000559460 SLC7A14Q8TBB6 771 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 CSGALNACT1Q8TDX6 532 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 GAB3Q8WWW8 586 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 MSANTD3Q96H12 275 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 PGBD1Q96JS3 809 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 NLRP4Q96MN2 994 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 ANO3Q9BYT9 981 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 CEP295Q9C0D2 2601 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 SMOC1Q9H4F8 434 aa10.88□□□□□ -0.67
SMAD3-211ENST00000559460 BAZ2BQ9UIF8 2168 aaKnown RBP10.87□□□□□ -0.67
SMAD3-211ENST00000559460 SF3B1O75533 1304 aaKnown RBP eCLIP10.87□□□□□ -0.675e-7■■■■■ 59.9
SMAD3-211ENST00000559460 SETXQ7Z333 2677 aaKnown RBP10.87□□□□□ -0.67
SMAD3-211ENST00000559460 ASPMQ8IZT6 3477 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 CNOT1A5YKK6 2376 aaKnown RBP10.87□□□□□ -0.67
SMAD3-211ENST00000559460 FRYQ5TBA9 3013 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 CCER2I3L3R5 266 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 K7ESF4 209 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 HIP1O00291 1037 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 TADA2AO75478 443 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 DDAH1O94760 285 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 TOP3BO95985 862 aaKnown RBP10.87□□□□□ -0.67
SMAD3-211ENST00000559460 CHRNB1P11230 501 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 CCNE1P24864 410 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 GDI1P31150 447 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 SETQ01105 290 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-211ENST00000559460 PRKCEQ02156 737 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 ANKRD45Q5TZF3 282 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 NFXL1Q6ZNB6 911 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 CEP57Q86XR8 500 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 HACE1Q8IYU2 909 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 MAP3K14Q99558 947 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 PLA2G2FQ9BZM2 168 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 SLC32A1Q9H598 525 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 AGPAT5Q9NUQ2 364 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 HCFC1R1Q9NWW0 138 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 ADAM28Q9UKQ2 775 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 GREB1Q4ZG55 1949 aa10.87□□□□□ -0.67
SMAD3-211ENST00000559460 WDR64B1ANS9 1081 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 ZNF263O14978 683 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 CSRP1P21291 193 aaKnown RBP10.86□□□□□ -0.67
SMAD3-211ENST00000559460 MLH1P40692 756 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 AFF1P51825 1210 aaKnown RBP10.86□□□□□ -0.67
SMAD3-211ENST00000559460 KPNA1P52294 538 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-211ENST00000559460 NAPAP54920 295 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 ELF2Q15723 593 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 DGKKQ5KSL6 1271 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 PLA2G2CQ5R387 149 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 AXDND1Q5T1B0 1012 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-211ENST00000559460 TANGO2Q6ICL3 276 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 TCEAL6Q6IPX3 200 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 PDXDC1Q6P996 788 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 PRSS55Q6UWB4 352 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-211ENST00000559460 KBTBD6Q86V97 674 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 YAF2Q8IY57 180 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 TCEAL3Q969E4 200 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 ZNF334Q9HCZ1 680 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-211ENST00000559460 DNMT3BQ9UBC3 853 aaKnown RBP10.86□□□□□ -0.67
SMAD3-211ENST00000559460 SEPT9Q9UHD8 586 aaPredicted RBP10.86□□□□□ -0.67
SMAD3-211ENST00000559460 WASF3Q9UPY6 502 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 MSRB2Q9Y3D2 182 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 SPEGQ15772 3267 aa10.86□□□□□ -0.67
SMAD3-211ENST00000559460 SALL3Q9BXA9 1300 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 HYAL3O43820 417 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-211ENST00000559460 ERLIN2O94905 339 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 PLEKHA8P1O95397 391 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 RHOP08100 348 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 POU2F2P09086 479 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 PSMC3P17980 439 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 HOXA6P31267 233 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 SREBF1P36956 1147 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 RAP1GAPP47736 663 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 SCNN1GP51170 649 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 ADCY7P51828 1080 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 FGD1P98174 961 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 CREB5Q02930 508 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 NCBP1Q09161 790 aaKnown RBP10.85□□□□□ -0.67
SMAD3-211ENST00000559460 C19orf57Q0VDD7 668 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 AP3B2Q13367 1082 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 PSMD5Q16401 504 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 COL28A1Q2UY09 1125 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 UVSSAQ2YD98 709 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 MTERF2Q49AM1 385 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 MRPL10Q7Z7H8 261 aaKnown RBP10.85□□□□□ -0.67
SMAD3-211ENST00000559460 PROSER1Q86XN7 944 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 TEX2Q8IWB9 1127 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 ZNF654Q8IZM8 581 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 ZNF687Q8N1G0 1237 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 NCOA7Q8NI08 942 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 DEPDC1BQ8WUY9 529 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 JPH2Q9BR39 696 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-211ENST00000559460 GPR62Q9BZJ7 368 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 TRIM6Q9C030 488 aaPredicted RBP10.85□□□□□ -0.67
SMAD3-211ENST00000559460 SENP2Q9HC62 589 aa10.85□□□□□ -0.67
SMAD3-211ENST00000559460 TMEM9BQ9NQ34 198 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms