RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 NGRNQ9NPE2 291 aaKnown RBP12.07□□□□□ -0.48
SPG11-216ENST00000559347 KCND2Q9NZV8 630 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 CLEC1BQ9P126 229 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 KANSL3Q9P2N6 904 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 BARX2Q9UMQ3 279 aaPredicted RBP12.07□□□□□ -0.48
SPG11-216ENST00000559347 USP20Q9Y2K6 914 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 GIT1Q9Y2X7 761 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 C2orf16Q68DN1 1984 aa12.07□□□□□ -0.48
SPG11-216ENST00000559347 ANK1P16157 1881 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 CCDC169A6NNP5 214 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 PER2O15055 1255 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 SSBP05455 408 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPG11-216ENST00000559347 PLA2G4BP0C869 781 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 PLCG1P19174 1290 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 UBA7P41226 1012 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 RBM10P98175 930 aaKnown RBP12.06□□□□□ -0.48
SPG11-216ENST00000559347 KCNC3Q14003 757 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 KARSQ15046 597 aaKnown RBP12.06□□□□□ -0.48
SPG11-216ENST00000559347 CLUL1Q15846 466 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 TMEM132AQ24JP5 1023 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 POTEHQ6S545 545 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 TAS1R3Q7RTX0 852 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 DDX53Q86TM3 631 aaKnown RBP12.06□□□□□ -0.48
SPG11-216ENST00000559347 COLGALT2Q8IYK4 626 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 VPS52Q8N1B4 723 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 GSTCDQ8NEC7 633 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 CALML4Q96GE6 196 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 FAM193BQ96PV7 902 aaPredicted RBP12.06□□□□□ -0.48
SPG11-216ENST00000559347 ADPGKQ9BRR6 497 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 C17orf75Q9HAS0 396 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 MARCH5Q9NX47 278 aa12.06□□□□□ -0.48
SPG11-216ENST00000559347 FBXO2Q9UK22 296 aaPredicted RBP12.06□□□□□ -0.48
SPG11-216ENST00000559347 C2orf71A6NGG8 1288 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 NRP1O14786 923 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 MBTPS2O43462 519 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 RECQL4O94761 1208 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 MARCKSP29966 332 aaPredicted RBP12.05□□□□□ -0.48
SPG11-216ENST00000559347 GRIK3Q13003 919 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
SPG11-216ENST00000559347 DCAF4L1Q3SXM0 396 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 NT5DC1Q5TFE4 455 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 ATF7IP2Q5U623 682 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 FAM178BQ8IXR5 827 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 SMRP1Q8NCR6 262 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 USP28Q96RU2 1077 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 RPS6KC1Q96S38 1066 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 ZSCAN16Q9H4T2 348 aaPredicted RBP12.05□□□□□ -0.48
SPG11-216ENST00000559347 TMEM134Q9H6X4 195 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 KMT5AQ9NQR1 393 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 BLOC1S4Q9NUP1 217 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 MIOSQ9NXC5 875 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 KLK14Q9P0G3 267 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 PARP2Q9UGN5 583 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 CD207Q9UJ71 328 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 FAM50BQ9Y247 325 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 PRG3Q9Y2Y8 225 aaPredicted RBP12.05□□□□□ -0.48
SPG11-216ENST00000559347 IRAK3Q9Y616 596 aa12.05□□□□□ -0.48
SPG11-216ENST00000559347 MORC2Q9Y6X9 1032 aaPredicted RBP12.05□□□□□ -0.48
SPG11-216ENST00000559347 MTCL1Q9Y4B5 1905 aaKnown RBP12.05□□□□□ -0.48
SPG11-216ENST00000559347 NPHP3-ACAD11A0A0J9YXS1 232 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.04□□□□□ -0.48
SPG11-216ENST00000559347 F8W810 466 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 K7ERI5 159 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 PTGESO14684 152 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 SLC16A4O15374 487 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 EFEMP2O95967 443 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 CTSAP10619 480 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 PLS3P13797 630 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 OR1G1P47890 313 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 CEBPZQ03701 1054 aaKnown RBP12.04□□□□□ -0.48
SPG11-216ENST00000559347 COASYQ13057 564 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 PTPN14Q15678 1187 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 SMAD2Q15796 467 aaKnown RBP12.04□□□□□ -0.48
SPG11-216ENST00000559347 ARSHQ5FYA8 562 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 GPBP1Q86WP2 473 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 RNF168Q8IYW5 571 aaPredicted RBP12.04□□□□□ -0.48
SPG11-216ENST00000559347 MRPL43Q8N983 215 aaKnown RBP12.04□□□□□ -0.48
SPG11-216ENST00000559347 RASSF8Q8NHQ8 419 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 SPIRE2Q8WWL2 714 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 AUTS2Q8WXX7 1259 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 LARP4BQ92615 738 aaKnown RBP12.04□□□□□ -0.48
SPG11-216ENST00000559347 RAD54LQ92698 747 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 ACO2Q99798 780 aaKnown RBP12.04□□□□□ -0.48
SPG11-216ENST00000559347 REEP2Q9BRK0 252 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 CCSER1Q9C0I3 900 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 SNTG2Q9NY99 539 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 STK39Q9UEW8 545 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 ODF2LQ9ULJ1 636 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 TNFSF13BQ9Y275 285 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 FAN1Q9Y2M0 1017 aa12.04□□□□□ -0.48
SPG11-216ENST00000559347 RBM19Q9Y4C8 960 aaKnown RBP12.04□□□□□ -0.48
SPG11-216ENST00000559347 SRPRBQ9Y5M8 271 aaKnown RBP12.04□□□□□ -0.48
SPG11-216ENST00000559347 SFI1A8K8P3 1242 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 ABLIM1O14639 778 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 SOD2P04179 222 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 SRGAP2BP0DMP2 458 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 CA8P35219 290 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 NASPP49321 788 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms