RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 EOMESO95936 686 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 BMP15O95972 392 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 POMCP01189 267 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 EDN1P05305 212 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 PRKCBP05771 671 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 ITGA4P13612 1032 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 PLCG1P19174 1290 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 AKAP5P24588 427 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 GTF2F1P35269 517 aaKnown RBP eCLIP10.64□□□□□ -0.71
SPG11-214ENST00000558989 IRS1P35568 1242 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 TCEAL1Q15170 157 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 TCEAL5Q5H9L2 206 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 NOTUMQ6P988 496 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 AGMOQ6ZNB7 445 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 RBM23Q86U06 439 aaKnown RBP10.64□□□□□ -0.71
SPG11-214ENST00000558989 LRRC43Q8N309 656 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 LRRC15Q8TF66 581 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 POF1BQ8WVV4 589 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 PMM1Q92871 262 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 MRPL38Q96DV4 380 aaKnown RBP10.64□□□□□ -0.71
SPG11-214ENST00000558989 NT5C3AQ9H0P0 336 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 NXF3Q9H4D5 531 aaKnown RBP10.64□□□□□ -0.71
SPG11-214ENST00000558989 ZHX3Q9H4I2 956 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 PIF1Q9H611 641 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 KLK14Q9P0G3 267 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 THEGQ9P2T0 379 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 PARP2Q9UGN5 583 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 IPPQ9Y573 584 aa10.64□□□□□ -0.71
SPG11-214ENST00000558989 SLC16A4O15374 487 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 FGF18O76093 207 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 KRT18P05783 430 aaKnown RBP10.63□□□□□ -0.71
SPG11-214ENST00000558989 RB1P06400 928 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 LONP1P36776 959 aaKnown RBP10.63□□□□□ -0.71
SPG11-214ENST00000558989 NAMPTP43490 491 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 RAB27AP51159 221 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 PRPF4BQ13523 1007 aaKnown RBP10.63□□□□□ -0.71
SPG11-214ENST00000558989 TMEM119Q4V9L6 283 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 GLB1LQ6UWU2 654 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 C1orf186Q6ZWK4 172 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 GPBP1Q86WP2 473 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 SMG8Q8ND04 991 aaKnown RBP10.63□□□□□ -0.71
SPG11-214ENST00000558989 SPPL3Q8TCT6 385 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 SYMPKQ92797 1274 aaKnown RBP10.63□□□□□ -0.71
SPG11-214ENST00000558989 KIFAP3Q92845 792 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 PGBD4Q96DM1 585 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 CHAMP1Q96JM3 812 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 ZSCAN16Q9H4T2 348 aaPredicted RBP10.63□□□□□ -0.71
SPG11-214ENST00000558989 RSAD1Q9HA92 442 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 AAASQ9NRG9 546 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 FBXO2Q9UK22 296 aaPredicted RBP10.63□□□□□ -0.71
SPG11-214ENST00000558989 C5orf67F2Z3F1 127 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 OFD1O75665 1012 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 F13A1P00488 732 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 ZSCAN22P10073 491 aaPredicted RBP10.63□□□□□ -0.71
SPG11-214ENST00000558989 HARSP12081 509 aaKnown RBP10.63□□□□□ -0.71
SPG11-214ENST00000558989 SKIP12755 728 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 LAG3P18627 525 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 MLH1P40692 756 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 KCNQ1P51787 676 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 PPP2R5AQ15172 486 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 MAPK6Q16659 721 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 NOMO2Q5JPE7 1267 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 EEF1DP3Q658K8 133 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 KCNT2Q6UVM3 1135 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 ZNF280BQ86YH2 543 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 DAW1Q8N136 415 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 PDILTQ8N807 584 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 SYT2Q8N9I0 419 aaPredicted RBP10.63□□□□□ -0.71
SPG11-214ENST00000558989 DDX12PQ92771 950 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 AK8Q96MA6 479 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 ZNF558Q96NG5 402 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 GAD1Q99259 594 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 C2orf40Q9H1Z8 148 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 KMT5AQ9NQR1 393 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 TBC1D13Q9NVG8 400 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 PRMT7Q9NVM4 692 aaPredicted RBP10.63□□□□□ -0.71
SPG11-214ENST00000558989 DNAJB4Q9UDY4 337 aa10.63□□□□□ -0.71
SPG11-214ENST00000558989 K7ERI5 159 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 B4GALT3O60512 393 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 LILRB3O75022 631 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 POU3F3P20264 500 aaPredicted RBP10.62□□□□□ -0.71
SPG11-214ENST00000558989 AXLP30530 894 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 NPTX2P47972 431 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 SLC12A3P55017 1021 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 MAPK7Q13164 816 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 DMP1Q13316 513 aaPredicted RBP10.62□□□□□ -0.71
SPG11-214ENST00000558989 CAMK1Q14012 370 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 CLUL1Q15846 466 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 HYIQ5T013 277 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 PLPP4Q5VZY2 271 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 CDCA2Q69YH5 1023 aaPredicted RBP10.62□□□□□ -0.71
SPG11-214ENST00000558989 SLC27A1Q6PCB7 646 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 ADGRD2Q7Z7M1 963 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 ZBTB33Q86T24 672 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 URGCPQ8TCY9 931 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 RABGGTAQ92696 567 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 ZFP42Q96MM3 310 aa10.62□□□□□ -0.71
SPG11-214ENST00000558989 ZNF396Q96N95 335 aaPredicted RBP10.62□□□□□ -0.71
SPG11-214ENST00000558989 FAM193BQ96PV7 902 aaPredicted RBP10.62□□□□□ -0.71
SPG11-214ENST00000558989 PLVAPQ9BX97 442 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms