RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 GDF9O60383 454 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 POMCP01189 267 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 PROS1P07225 676 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CYP3A4P08684 503 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CALM1P0DP23 149 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CALM2P0DP24 149 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CALM3P0DP25 149 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 OR1G1P47890 313 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CLK2P49760 499 aaKnown RBP7.6□□□□□ -1.19
LRRC28-207ENST00000558500 ADCY7P51828 1080 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 NRLP54845 237 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 NTHL1P78549 312 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 PRKCEQ02156 737 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 PTH1RQ03431 593 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 MTAPQ13126 283 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 FZD5Q13467 585 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CSRP2Q16527 193 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 N4BP2L1Q5TBK1 243 aaPredicted RBP7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CASC1Q6TDU7 716 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 ZNF852Q6ZMS4 543 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 NFXL1Q6ZNB6 911 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 PRR23CQ6ZRP0 262 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 TPRG1Q6ZUI0 275 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CATSPER4Q7RTX7 472 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 GRASPQ7Z6J2 395 aaPredicted RBP7.6□□□□□ -1.19
LRRC28-207ENST00000558500 ZNF410Q86VK4 478 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 RAB11FIP4Q86YS3 637 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 PARP9Q8IXQ6 854 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 ZNF687Q8N1G0 1237 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 TMTC2Q8N394 836 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CELF5Q8N6W0 485 aaKnown RBP7.6□□□□□ -1.19
LRRC28-207ENST00000558500 CRYGNQ8WXF5 182 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 FGF13Q92913 245 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 MBOAT7Q96N66 472 aa7.6□□□□□ -1.19
LRRC28-207ENST00000558500 FAM217BQ9NTX9 383 aaPredicted RBP7.6□□□□□ -1.19
LRRC28-207ENST00000558500 SETXQ7Z333 2677 aaKnown RBP7.59□□□□□ -1.19
LRRC28-207ENST00000558500 IGKV6-21A0A0C4DH24 114 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 SMCO2A6NFE2 343 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 SHISA7A6NL88 538 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 WDR64B1ANS9 1081 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 F8W810 466 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 PRC1O43663 620 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 FOXD2O60548 495 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-207ENST00000558500 LIFRP42702 1097 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 DNM2P50570 870 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 SETQ01105 290 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-207ENST00000558500 ADCY1Q08828 1119 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 TARBP2Q15633 366 aaKnown RBP7.59□□□□□ -1.19
LRRC28-207ENST00000558500 UGCGQ16739 394 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 UBXN11Q5T124 520 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 B4GALNT3Q6L9W6 998 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 PRR23BQ6ZRT6 265 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 CHD1LQ86WJ1 897 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 SMC5Q8IY18 1101 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 COLGALT2Q8IYK4 626 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 GPR65Q8IYL9 337 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 FANCBQ8NB91 859 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 B3GALT6Q96L58 329 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 CEP89Q96ST8 783 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 KXD1Q9BQD3 176 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 PHF20Q9BVI0 1012 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 GLT8D2Q9H1C3 349 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 DISC1Q9NRI5 854 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.59□□□□□ -1.19
LRRC28-207ENST00000558500 FNIP2Q9P278 1114 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 MRPS17Q9Y2R5 130 aaKnown RBP7.59□□□□□ -1.19
LRRC28-207ENST00000558500 SAMM50Q9Y512 469 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 COL4A3Q01955 1670 aa7.59□□□□□ -1.19
LRRC28-207ENST00000558500 CNTNAP5Q8WYK1 1306 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 hCG_1984214I3L0E3 225 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 HNRNPA1P09651 372 aaKnown RBP eCLIP7.58□□□□□ -1.2
LRRC28-207ENST00000558500 RPL17P18621 184 aaKnown RBP7.58□□□□□ -1.2
LRRC28-207ENST00000558500 NCLP19338 710 aaKnown RBP7.58□□□□□ -1.2
LRRC28-207ENST00000558500 FECHP22830 423 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 CREMQ03060 361 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 DSC1Q08554 894 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 PPP2R5DQ14738 602 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 USP41Q3LFD5 358 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 JAKMIP3Q5VZ66 844 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 IL31Q6EBC2 164 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 RHPN2Q8IUC4 686 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 GLYCTKQ8IVS8 523 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 ZNF713Q8N859 430 aaPredicted RBP7.58□□□□□ -1.2
LRRC28-207ENST00000558500 ITFG1Q8TB96 612 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 TMEM87BQ96K49 555 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 GPR62Q9BZJ7 368 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 CHRDQ9H2X0 955 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 UBN1Q9NPG3 1134 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 HEBP1Q9NRV9 189 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 AGPAT5Q9NUQ2 364 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 BARHL2Q9NY43 387 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 SUCLA2Q9P2R7 463 aaPredicted RBP7.58□□□□□ -1.2
LRRC28-207ENST00000558500 FBXW11Q9UKB1 542 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 SLC12A7Q9Y666 1083 aa7.58□□□□□ -1.2
LRRC28-207ENST00000558500 ZZEF1O43149 2961 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 C2orf16Q68DN1 1984 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 FLNBO75369 2602 aaKnown RBP7.57□□□□□ -1.2
LRRC28-207ENST00000558500 TM4SF5O14894 197 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 MAFO75444 373 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-207ENST00000558500 NR1I2O75469 434 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms