RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 SMARCA1P28370 1054 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 USP4Q13107 963 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 SH2D4BQ5SQS7 431 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 RASIP1Q5U651 963 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 ZNF449Q6P9G9 518 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 FAM47EQ6ZV65 393 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 SYDE1Q6ZW31 735 aaPredicted RBP11.99□□□□□ -0.49
PCAT29-201ENST00000558411 ZNF365Q70YC5 407 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 CCNJLQ8IV13 435 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 REXO1Q8N1G1 1221 aaKnown RBP11.99□□□□□ -0.49
PCAT29-201ENST00000558411 ZCRB1Q8TBF4 217 aaKnown RBP11.99□□□□□ -0.49
PCAT29-201ENST00000558411 NUDT12Q9BQG2 462 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 CCDC77Q9BR77 488 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 FGFBP2Q9BYJ0 223 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 MMADHCQ9H3L0 296 aaPredicted RBP11.99□□□□□ -0.49
PCAT29-201ENST00000558411 TYW1Q9NV66 732 aaKnown RBP11.99□□□□□ -0.49
PCAT29-201ENST00000558411 AJAP1Q9UKB5 411 aaPredicted RBP11.99□□□□□ -0.49
PCAT29-201ENST00000558411 TBC1D30Q9Y2I9 924 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 PCDHGA4Q9Y5G9 962 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 ALG6Q9Y672 507 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 POTEMA6NI47 508 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 C2CD2LO14523 706 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 PRPF4O43172 522 aaKnown RBP eCLIP11.98□□□□□ -0.49
PCAT29-201ENST00000558411 STARD3NLO95772 234 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 WDR4P57081 412 aaKnown RBP11.98□□□□□ -0.49
PCAT29-201ENST00000558411 TFAP4Q01664 338 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 SPARCL1Q14515 664 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 STAT4Q14765 748 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 PDK4Q16654 411 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 ACBD5Q5T8D3 534 aaPredicted RBP11.98□□□□□ -0.49
PCAT29-201ENST00000558411 ZDHHC14Q8IZN3 488 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 WNT8AQ9H1J5 351 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 LRRC19Q9H756 370 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 SUDS3Q9H7L9 328 aaPredicted RBP11.98□□□□□ -0.49
PCAT29-201ENST00000558411 EURLQ9NYK6 297 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 TMOD4Q9NZQ9 345 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 ZFP69BQ9UJL9 534 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 UMODL1Q5DID0 1318 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 SCN7AQ01118 1682 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 A8MXQ7 604 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 hCG_1984214I3L0E3 225 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 CAPN9O14815 690 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 TP73O15350 636 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 CALUO43852 315 aaPredicted RBP11.98□□□□□ -0.49
PCAT29-201ENST00000558411 ADAMTS2O95450 1211 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 CBX6O95503 412 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 LYNP07948 512 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 SESN3P58005 492 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 LIN52Q52LA3 116 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 HERC4Q5GLZ8 1057 aaPredicted RBP11.98□□□□□ -0.49
PCAT29-201ENST00000558411 CCDC125Q86Z20 511 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 GLYCTKQ8IVS8 523 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 SRRM1Q8IYB3 904 aaKnown RBP11.98□□□□□ -0.49
PCAT29-201ENST00000558411 ZNF713Q8N859 430 aaPredicted RBP11.98□□□□□ -0.49
PCAT29-201ENST00000558411 DDX17Q92841 729 aaKnown RBP11.98□□□□□ -0.49
PCAT29-201ENST00000558411 ARHGEF26Q96DR7 871 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 IWS1Q96ST2 819 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 BTBD10Q9BSF8 475 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 CADM1Q9BY67 442 aaKnown RBP11.98□□□□□ -0.49
PCAT29-201ENST00000558411 STK33Q9BYT3 514 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 CYLDQ9NQC7 956 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 GCNT4Q9P109 453 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 COG5Q9UP83 839 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 NAALADL1Q9UQQ1 740 aa11.98□□□□□ -0.49
PCAT29-201ENST00000558411 MAST2Q6P0Q8 1798 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 DCCP43146 1447 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 THAP12O43422 761 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 SLC37A4O43826 429 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 FAM163BP0C2L3 166 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 CCDC166P0CW27 439 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 ABCB4P21439 1286 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 IGHMBP2P38935 993 aaKnown RBP11.97□□□□□ -0.49
PCAT29-201ENST00000558411 CDK7P50613 346 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 CTTNQ14247 550 aaKnown RBP11.97□□□□□ -0.49
PCAT29-201ENST00000558411 CTC1Q2NKJ3 1217 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 TAF1BQ53T94 588 aaPredicted RBP11.97□□□□□ -0.49
PCAT29-201ENST00000558411 SLC13A5Q86YT5 568 aaPredicted RBP11.97□□□□□ -0.49
PCAT29-201ENST00000558411 RELL1Q8IUW5 271 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 CYP4X1Q8N118 509 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 DENND1AQ8TEH3 1009 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 STMN2Q93045 179 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 MIPEPQ99797 713 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 ASCC2Q9H1I8 757 aaPredicted RBP11.97□□□□□ -0.49
PCAT29-201ENST00000558411 GALNT8Q9NY28 637 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 TBC1D7Q9P0N9 293 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 BLOC1S6Q9UL45 172 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 G3BP2Q9UN86 482 aaKnown RBP11.97□□□□□ -0.49
PCAT29-201ENST00000558411 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.97□□□□□ -0.49
PCAT29-201ENST00000558411 TOGARAM1Q9Y4F4 1720 aa11.97□□□□□ -0.49
PCAT29-201ENST00000558411 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 PDXKO00764 312 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 TBX10O75333 385 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 MAN1A1P33908 653 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 EVX2Q03828 476 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 DNAJC3Q13217 504 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 MTA1Q13330 715 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 SIX1Q15475 284 aaPredicted RBP11.96□□□□□ -0.49
PCAT29-201ENST00000558411 ECM1Q16610 540 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 KNOP1Q1ED39 458 aaKnown RBP11.96□□□□□ -0.49
PCAT29-201ENST00000558411 ACSBG2Q5FVE4 666 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms