RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PADI6Q6TGC4 694 aa17.2■□□□□ 0.34
TPM1-211ENST00000558314 BMP8AQ7Z5Y6 402 aa17.2■□□□□ 0.34
TPM1-211ENST00000558314 PALB2Q86YC2 1186 aa17.2■□□□□ 0.34
TPM1-211ENST00000558314 IFNLR1Q8IU57 520 aaPredicted RBP17.2■□□□□ 0.34
TPM1-211ENST00000558314 MCPH1Q8NEM0 835 aa17.2■□□□□ 0.34
TPM1-211ENST00000558314 PRSS33Q8NF86 280 aa17.2■□□□□ 0.34
TPM1-211ENST00000558314 DEPTORQ8TB45 409 aa17.2■□□□□ 0.34
TPM1-211ENST00000558314 HASPINQ8TF76 798 aa17.2■□□□□ 0.34
TPM1-211ENST00000558314 MAN1C1Q9NR34 630 aa17.2■□□□□ 0.34
TPM1-211ENST00000558314 STK39Q9UEW8 545 aa17.2■□□□□ 0.34
TPM1-211ENST00000558314 NOL7Q9UMY1 257 aaKnown RBP17.2■□□□□ 0.34
TPM1-211ENST00000558314 TEX28O15482 410 aa17.19■□□□□ 0.34
TPM1-211ENST00000558314 BRD1O95696 1058 aa17.19■□□□□ 0.34
TPM1-211ENST00000558314 ADH1AP07327 375 aa17.19■□□□□ 0.34
TPM1-211ENST00000558314 XRCC6P12956 609 aaKnown RBP eCLIP17.19■□□□□ 0.34
TPM1-211ENST00000558314 CCT6AP40227 531 aaKnown RBP17.19■□□□□ 0.34
TPM1-211ENST00000558314 MRE11P49959 708 aa17.19■□□□□ 0.34
TPM1-211ENST00000558314 CCDC149Q6ZUS6 474 aa17.19■□□□□ 0.34
TPM1-211ENST00000558314 BSNDQ8WZ55 320 aa17.19■□□□□ 0.34
TPM1-211ENST00000558314 ACSF2Q96CM8 615 aaPredicted RBP17.19■□□□□ 0.34
TPM1-211ENST00000558314 ASIC4Q96FT7 647 aa17.19■□□□□ 0.34
TPM1-211ENST00000558314 ZSCAN31Q96LW9 406 aaPredicted RBP17.19■□□□□ 0.34
TPM1-211ENST00000558314 LLPHQ9BRT6 129 aaKnown RBP17.19■□□□□ 0.34
TPM1-211ENST00000558314 POLR3CQ9BUI4 534 aaPredicted RBP17.19■□□□□ 0.34
TPM1-211ENST00000558314 KCNH6Q9H252 994 aa17.19■□□□□ 0.34
TPM1-211ENST00000558314 FOXP1Q9H334 677 aaPredicted RBP17.19■□□□□ 0.34
TPM1-211ENST00000558314 PRMT7Q9NVM4 692 aaPredicted RBP17.19■□□□□ 0.34
TPM1-211ENST00000558314 SORCS3Q9UPU3 1222 aa17.19■□□□□ 0.34
TPM1-211ENST00000558314 TADA2AO75478 443 aa17.18■□□□□ 0.34
TPM1-211ENST00000558314 GLUD1P00367 558 aa17.18■□□□□ 0.34
TPM1-211ENST00000558314 PRKCBP05771 671 aa17.18■□□□□ 0.34
TPM1-211ENST00000558314 RPL17P18621 184 aaKnown RBP17.18■□□□□ 0.34
TPM1-211ENST00000558314 RBM25P49756 843 aaKnown RBP17.18■□□□□ 0.34
TPM1-211ENST00000558314 HMGN5P82970 282 aaKnown RBP17.18■□□□□ 0.34
TPM1-211ENST00000558314 DSC1Q08554 894 aa17.18■□□□□ 0.34
TPM1-211ENST00000558314 PRPF4BQ13523 1007 aaKnown RBP17.18■□□□□ 0.34
TPM1-211ENST00000558314 FUT10Q6P4F1 479 aa17.18■□□□□ 0.34
TPM1-211ENST00000558314 GPR149Q86SP6 731 aa17.18■□□□□ 0.34
TPM1-211ENST00000558314 NOSTRINQ8IVI9 506 aa17.18■□□□□ 0.34
TPM1-211ENST00000558314 KIFC3Q9BVG8 833 aa17.18■□□□□ 0.34
TPM1-211ENST00000558314 NFKBIZQ9BYH8 718 aa17.18■□□□□ 0.34
TPM1-211ENST00000558314 SNTG2Q9NY99 539 aa17.18■□□□□ 0.34
TPM1-211ENST00000558314 SSX2IPQ9Y2D8 614 aa17.18■□□□□ 0.34
TPM1-211ENST00000558314 A0A1B0GUA9 196 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 CASTOR2A6NHX0 329 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 TTLL13PA6NNM8 815 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 LILRB3O75022 631 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 GBP2P32456 591 aaPredicted RBP17.17■□□□□ 0.34
TPM1-211ENST00000558314 GRIK3Q13003 919 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 MAPK6Q16659 721 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 HAUS3Q68CZ6 603 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 ELMSAN1Q6PJG2 1045 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 CEP57Q86XR8 500 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 PLCD3Q8N3E9 789 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 FBXO18Q8NFZ0 1043 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 RIN2Q8WYP3 895 aaPredicted RBP17.17■□□□□ 0.34
TPM1-211ENST00000558314 PHOX2BQ99453 314 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 ADPGKQ9BRR6 497 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 GPR62Q9BZJ7 368 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 C2orf40Q9H1Z8 148 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 MFSD1Q9H3U5 465 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 PDZD7Q9H5P4 517 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 PIDD1Q9HB75 910 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 FAM86C1Q9NVL1 165 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 LRWD1Q9UFC0 647 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 GDAQ9Y2T3 454 aa17.17■□□□□ 0.34
TPM1-211ENST00000558314 CCDC195A0A1B0GUA6 201 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 N4BP3O15049 544 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 INPPL1O15357 1258 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 RFPL2O75678 378 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 CYP11B2P19099 503 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 RPA1P27694 616 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 AVPR2P30518 371 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 PTPN5P54829 565 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 ZRSR1Q15695 479 aaKnown RBP17.16■□□□□ 0.34
TPM1-211ENST00000558314 ECM1Q16610 540 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 KIAA0319Q5VV43 1072 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 OTOP3Q7RTS5 596 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 UBALD2Q8IYN6 164 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 SNX29Q8TEQ0 813 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 IFT74Q96LB3 600 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 PRIMPOLQ96LW4 560 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 PAAF1Q9BRP4 392 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 BHMT2Q9H2M3 363 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 SH2B1Q9NRF2 756 aaPredicted RBP17.16■□□□□ 0.34
TPM1-211ENST00000558314 ADAM28Q9UKQ2 775 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 KIAA1024Q9UPX6 916 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 ZNF318Q5VUA4 2279 aa17.16■□□□□ 0.34
TPM1-211ENST00000558314 ZDBF2Q9HCK1 2354 aa17.15■□□□□ 0.34
TPM1-211ENST00000558314 CENPBP07199 599 aaPredicted RBP17.15■□□□□ 0.34
TPM1-211ENST00000558314 DSG1Q02413 1049 aa17.15■□□□□ 0.34
TPM1-211ENST00000558314 HSP90AA2PQ14568 343 aaPredicted RBP17.15■□□□□ 0.34
TPM1-211ENST00000558314 USP41Q3LFD5 358 aa17.15■□□□□ 0.34
TPM1-211ENST00000558314 CDCA2Q69YH5 1023 aaPredicted RBP17.15■□□□□ 0.34
TPM1-211ENST00000558314 MCTP1Q6DN14 999 aa17.15■□□□□ 0.34
TPM1-211ENST00000558314 PRSS55Q6UWB4 352 aaPredicted RBP17.15■□□□□ 0.34
TPM1-211ENST00000558314 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
TPM1-211ENST00000558314 ZDHHC14Q8IZN3 488 aa17.15■□□□□ 0.34
TPM1-211ENST00000558314 GSTCDQ8NEC7 633 aa17.15■□□□□ 0.34
TPM1-211ENST00000558314 SMG7Q92540 1137 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms