RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 A0A1W2PQJ5 194 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 TRIM49BA6NDI0 452 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 TMEM247A6NEH6 219 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 CALB1P05937 261 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 TRIM49P0CI25 452 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 TRIM49CP0CI26 452 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 KCNH2Q12809 1159 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 SCUBE1Q8IWY4 988 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 TRPC7Q9HCX4 862 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 CD209Q9NNX6 404 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 NSMCE4AQ9NXX6 385 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 ADAM22Q9P0K1 906 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 MRPL11Q9Y3B7 192 aaKnown RBP12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 RFX7Q2KHR2 1363 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 TULP2O00295 520 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 ANGPT2O15123 496 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 PJA2O43164 708 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 TNFAIP8O95379 198 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 GSNP06396 782 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 GJA8P48165 433 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 USH1GQ495M9 461 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 ASPRV1Q53RT3 343 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 LPCAT2Q7L5N7 544 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 TMEM245Q9H330 911 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 MANSC1Q9H8J5 431 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 DDX20Q9UHI6 824 aaKnown RBP12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 REREQ9P2R6 1566 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 OATP04181 439 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 FAM58BPP0C7Q3 252 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 C16orf72Q14CZ0 275 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 TMED8Q6PL24 325 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 B3GNT6Q6ZMB0 384 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 CCNYL1Q8N7R7 359 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 TBCKQ8TEA7 893 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 CEP95Q96GE4 821 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 CHP1Q99653 195 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 SLC13A1Q9BZW2 595 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 NRDE2Q9H7Z3 1164 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 ATXN10Q9UBB4 475 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 DAPK2Q9UIK4 370 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 F8VZ95 297 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 EFCAB14O75071 495 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 ALBP02768 609 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 POLR2MP0CAP2 368 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 TYK2P29597 1187 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 C21orf59P57076 290 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 MTHFD1LQ6UB35 978 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 NLRP9Q7RTR0 991 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 PRPF39Q86UA1 669 aaKnown RBP12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 STKLD1Q8NE28 680 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 STK32AQ8WU08 396 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 SLC38A10Q9HBR0 1119 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 PRDM15P57071 1507 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZNF233A6NK53 670 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 GOLGA8HP0CJ92 632 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 TSPY1Q01534 308 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 SNX30Q5VWJ9 437 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 JAMLQ86YT9 394 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 RBM15Q96T37 977 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 NUP85Q9BW27 656 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 HEMGNQ9BXL5 484 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 UBOX5O94941 541 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 LCA5LO95447 670 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 ENO3P13929 434 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 PSMA2P25787 234 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 GPATCH4Q5T3I0 446 aaKnown RBP12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 SMIM31A0A1B0GVY4 71 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 PI4K2BG5E9Z4 385 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 SRP72O76094 671 aaKnown RBP12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 CAPRIN1Q14444 709 aaKnown RBP12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 SURF1Q15526 300 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 BARGINQ6ZT62 677 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 ERICH1Q86X53 443 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 HACE1Q8IYU2 909 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZNF786Q8N393 782 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 TTC8Q8TAM2 541 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZNF212Q9UDV6 495 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 IP6K2Q9UHH9 426 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 HAO1Q9UJM8 370 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 PHTF1Q9UMS5 762 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 CDY2AQ9Y6F7 541 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 CDY1Q9Y6F8 540 aa12.42□□□□□ -0.42
CSPG4P12-201ENST00000558282 XPOTO43592 962 aaKnown RBP12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 GSTT1P30711 240 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 HSPA2P54652 639 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 POLA2Q14181 598 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 OASLQ15646 514 aaKnown RBP12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 ARMCX4Q5H9R4 360 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 PAPD7Q5XG87 772 aaKnown RBP12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 LRRC39Q96DD0 335 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 PAIP1Q9H074 479 aaKnown RBP12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 HECW2Q9P2P5 1572 aa12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 DNALI1O14645 258 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZBED4O75132 1171 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms