RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TMPRSS5Q9H3S3 457 aa4.58□□□□□ -1.68
SPG11-206ENST00000558093 DMRT3Q9NQL9 472 aa4.58□□□□□ -1.68
SPG11-206ENST00000558093 RBM12Q9NTZ6 932 aaKnown RBP4.58□□□□□ -1.68
SPG11-206ENST00000558093 MKS1Q9NXB0 559 aa4.58□□□□□ -1.68
SPG11-206ENST00000558093 EIF2B4Q9UI10 523 aaKnown RBP4.58□□□□□ -1.68
SPG11-206ENST00000558093 DNM3Q9UQ16 869 aa4.58□□□□□ -1.68
SPG11-206ENST00000558093 CLCA2Q9UQC9 943 aa4.58□□□□□ -1.68
SPG11-206ENST00000558093 COL4A3BPQ9Y5P4 624 aa4.58□□□□□ -1.68
SPG11-206ENST00000558093 GPR45Q9Y5Y3 372 aa4.58□□□□□ -1.68
SPG11-206ENST00000558093 KLRG2A4D1S0 409 aaPredicted RBP4.57□□□□□ -1.68
SPG11-206ENST00000558093 B5MCH6 92 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 NPIPB8E9PQR5 432 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 K7ESF4 209 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 ADCY6O43306 1168 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 FAM20BO75063 409 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 RECQL4O94761 1208 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 MYBL2P10244 700 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 IARSP41252 1262 aaKnown RBP4.57□□□□□ -1.68
SPG11-206ENST00000558093 CDKN1CP49918 316 aaPredicted RBP4.57□□□□□ -1.68
SPG11-206ENST00000558093 PRAMEF14Q5SWL7 426 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 DOK3Q7L591 496 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.57□□□□□ -1.68
SPG11-206ENST00000558093 CACTINQ8WUQ7 758 aaKnown RBP4.57□□□□□ -1.68
SPG11-206ENST00000558093 ZNF503Q96F45 646 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 MENTQ9BUN1 341 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 SENP6Q9GZR1 1112 aaPredicted RBP4.57□□□□□ -1.68
SPG11-206ENST00000558093 TRPS1Q9UHF7 1281 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 TRHDEQ9UKU6 1024 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 SORCS3Q9UPU3 1222 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 PCDHGA2Q9Y5H1 932 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 HS3ST3A1Q9Y663 406 aa4.57□□□□□ -1.68
SPG11-206ENST00000558093 ZMYM3Q14202 1370 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 ALG1L2C9J202 215 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 XPOTO43592 962 aaKnown RBP4.56□□□□□ -1.68
SPG11-206ENST00000558093 KATNA1O75449 491 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 ENDOD1O94919 500 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 SCAF4O95104 1147 aaKnown RBP4.56□□□□□ -1.68
SPG11-206ENST00000558093 AGXTP21549 392 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 IBSPP21815 317 aaPredicted RBP4.56□□□□□ -1.68
SPG11-206ENST00000558093 MCM7P33993 719 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 MTNR1BP49286 362 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 FLT3LGP49771 235 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 AMPD3Q01432 767 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 ABHD18Q0P651 414 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 VPS72Q15906 364 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 ABCB5Q2M3G0 1257 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 RABL3Q5HYI8 236 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 SYDE2Q5VT97 1194 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 C1QL3Q5VWW1 255 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 EFCAB12Q6NXP0 572 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 TRMT2AQ8IZ69 625 aaKnown RBP4.56□□□□□ -1.68
SPG11-206ENST00000558093 PQLC1Q8N2U9 271 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 LILRA3Q8N6C8 439 aaPredicted RBP4.56□□□□□ -1.68
SPG11-206ENST00000558093 PPM1NQ8N819 430 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 PRPF38AQ8NAV1 312 aaKnown RBP4.56□□□□□ -1.68
SPG11-206ENST00000558093 REPS2Q8NFH8 660 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 FBXO18Q8NFZ0 1043 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 OR7D4Q8NG98 312 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 OR52N2Q8NGI0 321 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 CPT1CQ8TCG5 803 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 TFAP2CQ92754 450 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 SLC2A13Q96QE2 648 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 SMAD5Q99717 465 aaKnown RBP4.56□□□□□ -1.68
SPG11-206ENST00000558093 LSM14BQ9BX40 385 aaKnown RBP4.56□□□□□ -1.68
SPG11-206ENST00000558093 CPEB1Q9BZB8 566 aaKnown RBP4.56□□□□□ -1.68
SPG11-206ENST00000558093 ZNF703Q9H7S9 590 aaPredicted RBP4.56□□□□□ -1.68
SPG11-206ENST00000558093 BCO1Q9HAY6 547 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 LANCL2Q9NS86 450 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 CEP72Q9P209 647 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 POGKQ9P215 609 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 SAP30BPQ9UHR5 308 aaKnown RBP4.56□□□□□ -1.68
SPG11-206ENST00000558093 MRFAP1Q9Y605 127 aa4.56□□□□□ -1.68
SPG11-206ENST00000558093 ANKRD62A6NC57 917 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 FAM171A2A8MVW0 826 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 RPS6KA4O75676 772 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 ADH4P08319 380 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 RAP2AP10114 183 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 GSPT1P15170 499 aaKnown RBP4.55□□□□□ -1.68
SPG11-206ENST00000558093 MGAT1P26572 445 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 MCAMP43121 646 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 EVA1CP58658 441 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 MTMR1Q13613 665 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 TOB2Q14106 344 aaPredicted RBP4.55□□□□□ -1.68
SPG11-206ENST00000558093 METTL24Q5JXM2 366 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 NAIF1Q69YI7 327 aaPredicted RBP4.55□□□□□ -1.68
SPG11-206ENST00000558093 SYNE4Q8N205 404 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 RNF169Q8NCN4 708 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 OR10H5Q8NGA6 315 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 ZNF483Q8TF39 744 aaPredicted RBP4.55□□□□□ -1.68
SPG11-206ENST00000558093 SSH1Q8WYL5 1049 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 TRIM8Q9BZR9 551 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 NRDE2Q9H7Z3 1164 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 PCDH12Q9NPG4 1184 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 TMEM140Q9NV12 185 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 MOCS1Q9NZB8 636 aa4.55□□□□□ -1.68
SPG11-206ENST00000558093 XDHP47989 1333 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 SHTN1A0MZ66 631 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 TRIM75PA6NK02 468 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 PLSCR1O15162 318 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 TRIM24O15164 1050 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms