RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TDP1Q9NUW8 608 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 PIH1D1Q9NWS0 290 aaKnown RBP4.42□□□□□ -1.7
TDP1-217ENST00000557782 IRAK4Q9NWZ3 460 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 NOP53Q9NZM5 478 aaKnown RBP4.42□□□□□ -1.7
TDP1-217ENST00000557782 MYO1AQ9UBC5 1043 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 ABCF2Q9UG63 623 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 AFF4Q9UHB7 1163 aaKnown RBP4.42□□□□□ -1.7
TDP1-217ENST00000557782 CPA4Q9UI42 421 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 PCDHB1Q9Y5F3 818 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 PCDHA3Q9Y5H8 950 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.41□□□□□ -1.7
TDP1-217ENST00000557782 A0A1W2PQJ5 194 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 A0A1W2PRQ8 180 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 A6NLC8 198 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 LGALS16A8MUM7 142 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 FADS2P1A8MWK0 482 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 B4E171 279 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 F8W8V4 182 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 AREL1O15033 823 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 NPC1O15118 1278 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 DHX15O43143 795 aaKnown RBP4.41□□□□□ -1.7
TDP1-217ENST00000557782 THAP12O43422 761 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 OPHN1O60890 802 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 ENDOD1O94919 500 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 PAPLNO95428 1278 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 CEACAM5P06731 702 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 POLBP06746 335 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 CELA3BP08861 270 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 EN2P19622 333 aaPredicted RBP4.41□□□□□ -1.7
TDP1-217ENST00000557782 TSPAN7P41732 249 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 RGS3P49796 1198 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 TERF1P54274 439 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 OXCT1P55809 520 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 KRT76Q01546 638 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 GRIN1Q05586 938 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 RAB39AQ14964 217 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 NBPF8Q3BBV2 869 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 ADCK5Q3MIX3 580 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 FBXO47Q5MNV8 452 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 FBXO38Q6PIJ6 1188 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 FASTKD5Q7L8L6 764 aaKnown RBP4.41□□□□□ -1.7
TDP1-217ENST00000557782 LRRTM4Q86VH4 590 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 CLEC10AQ8IUN9 316 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 TMTC1Q8IUR5 882 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 SPACA3Q8IXA5 215 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 SH2D3CQ8N5H7 860 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 TTLL11Q8NHH1 800 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 SLC16A10Q8TF71 515 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 WFDC12Q8WWY7 111 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 CLEC4DQ8WXI8 215 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 RUBCNQ92622 972 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 MAP6Q96JE9 813 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 CLPTM1LQ96KA5 538 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 TTC14Q96N46 770 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 SAMD11Q96NU1 681 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 HEPHQ9BQS7 1158 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 PYM1Q9BRP8 204 aaKnown RBP4.41□□□□□ -1.7
TDP1-217ENST00000557782 NOL10Q9BSC4 688 aaKnown RBP4.41□□□□□ -1.7
TDP1-217ENST00000557782 CNPPD1Q9BV87 410 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 SENP6Q9GZR1 1112 aaPredicted RBP4.41□□□□□ -1.7
TDP1-217ENST00000557782 WDCPQ9H6R7 721 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 JMJD4Q9H9V9 463 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 PLEKHA5Q9HAU0 1116 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 SACM1LQ9NTJ5 587 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 ARHGAP28Q9P2N2 729 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 CPNE7Q9UBL6 633 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 ERBB4Q15303 1308 aa4.41□□□□□ -1.7
TDP1-217ENST00000557782 LRRC14BA6NHZ5 514 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 ACOT7O00154 380 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 TRIM38O00635 465 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 SOAT2O75908 522 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 ANXA2P07355 339 aaKnown RBP4.4□□□□□ -1.71
TDP1-217ENST00000557782 NPR1P16066 1061 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 NOS3P29474 1203 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 STAT5AP42229 794 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 KIR2DL1P43626 348 aaPredicted RBP4.4□□□□□ -1.71
TDP1-217ENST00000557782 KIR2DL2P43627 348 aaPredicted RBP4.4□□□□□ -1.71
TDP1-217ENST00000557782 PAPOLAP51003 745 aaKnown RBP4.4□□□□□ -1.71
TDP1-217ENST00000557782 APBA1Q02410 837 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 PPP3CAQ08209 521 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 PTK2BQ14289 1009 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 SPARCL1Q14515 664 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 TIGD6Q17RP2 521 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 KHDC1Q4VXA5 237 aaKnown RBP4.4□□□□□ -1.71
TDP1-217ENST00000557782 KHDC1LQ5JSQ8 128 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 LYPD4Q6UWN0 246 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 GADL1Q6ZQY3 521 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 GAREM2Q75VX8 874 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 ZNF765Q7L2R6 523 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 ANKRD23Q86SG2 305 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 RSPH3Q86UC2 560 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 SLCO6A1Q86UG4 719 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 DZIP1LQ8IYY4 767 aaKnown RBP4.4□□□□□ -1.71
TDP1-217ENST00000557782 OR2I1PQ8NGU4 316 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 CXorf38Q8TB03 319 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 ASB12Q8WXK4 309 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 GATA6Q92908 595 aa4.4□□□□□ -1.71
TDP1-217ENST00000557782 NMD3Q96D46 503 aaKnown RBP4.4□□□□□ -1.71
TDP1-217ENST00000557782 LSM14BQ9BX40 385 aaKnown RBP4.4□□□□□ -1.71
TDP1-217ENST00000557782 PITHD1Q9GZP4 211 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms