RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 POU2F2P09086 479 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 SFPQP23246 707 aaKnown RBP eCLIP11.29□□□□□ -0.6
ABCD4-227ENST00000557554 HOXA9P31269 272 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 HOXA11P31270 313 aaPredicted RBP11.29□□□□□ -0.6
ABCD4-227ENST00000557554 SREBF1P36956 1147 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 OR1G1P47890 313 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 HDAC1Q13547 482 aaPredicted RBP11.29□□□□□ -0.6
ABCD4-227ENST00000557554 TANGO2Q6ICL3 276 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 B4GALNT3Q6L9W6 998 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 TYW1BQ6NUM6 668 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 TEX2Q8IWB9 1127 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 SMAP1Q8IYB5 467 aaPredicted RBP11.29□□□□□ -0.6
ABCD4-227ENST00000557554 C12orf50Q8NA57 414 aaPredicted RBP11.29□□□□□ -0.6
ABCD4-227ENST00000557554 PGBD1Q96JS3 809 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 CLSTN3Q9BQT9 956 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 SCNM1Q9BWG6 230 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 IL25Q9H293 177 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 IFT122Q9HBG6 1241 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 TRPV5Q9NQA5 729 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 HCFC1R1Q9NWW0 138 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 C2orf42Q9NWW7 574 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 DNMT3BQ9UBC3 853 aaKnown RBP11.29□□□□□ -0.6
ABCD4-227ENST00000557554 CNTNAP2Q9UHC6 1331 aa11.29□□□□□ -0.6
ABCD4-227ENST00000557554 ERICH2A1L162 156 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 FOSP01100 380 aaPredicted RBP11.28□□□□□ -0.6
ABCD4-227ENST00000557554 FCARP24071 287 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 CLK2P49760 499 aaKnown RBP11.28□□□□□ -0.6
ABCD4-227ENST00000557554 FOXC1Q12948 553 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 USP41Q3LFD5 358 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 WDR44Q5JSH3 913 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 PLA2G4DQ86XP0 818 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 MAP4K3Q8IVH8 894 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 PLEKHM2Q8IWE5 1019 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 SMG8Q8ND04 991 aaKnown RBP11.28□□□□□ -0.6
ABCD4-227ENST00000557554 CTCFLQ8NI51 663 aaPredicted RBP11.28□□□□□ -0.6
ABCD4-227ENST00000557554 FAM3CQ92520 227 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 ELSPBP1Q96BH3 223 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 FAM167AQ96KS9 214 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 SCLT1Q96NL6 688 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 INO80BQ9C086 356 aaPredicted RBP11.28□□□□□ -0.6
ABCD4-227ENST00000557554 RIC8AQ9NPQ8 531 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 NRBP2Q9NSY0 501 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 TBC1D22BQ9NU19 505 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 GDE1Q9NZC3 331 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 TAF6LQ9Y6J9 622 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 FREM2Q5SZK8 3169 aa11.28□□□□□ -0.6
ABCD4-227ENST00000557554 BPTFQ12830 3046 aa11.27□□□□□ -0.6
ABCD4-227ENST00000557554 CCL16O15467 120 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 DDAH1O94760 285 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 EPN2O95208 641 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 STBD1O95210 358 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 OATP04181 439 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 CYP21A2P08686 494 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 NOVA1P51513 510 aaKnown RBP11.27□□□□□ -0.61
ABCD4-227ENST00000557554 TRDNQ13061 729 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 PTGDRQ13258 359 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 PPM1LQ5SGD2 360 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 HEATR6Q6AI08 1181 aaKnown RBP11.27□□□□□ -0.61
ABCD4-227ENST00000557554 FUT10Q6P4F1 479 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 PRSS55Q6UWB4 352 aaPredicted RBP11.27□□□□□ -0.61
ABCD4-227ENST00000557554 ZNF410Q86VK4 478 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 KSR1Q8IVT5 923 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 ZNF654Q8IZM8 581 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 GSTCDQ8NEC7 633 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 ZCCHC14Q8WYQ9 949 aaKnown RBP11.27□□□□□ -0.61
ABCD4-227ENST00000557554 MCRS1Q96EZ8 462 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 NIFKQ9BYG3 293 aaKnown RBP11.27□□□□□ -0.61
ABCD4-227ENST00000557554 ANO3Q9BYT9 981 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 RNF39Q9H2S5 420 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 AGPAT5Q9NUQ2 364 aa11.27□□□□□ -0.61
ABCD4-227ENST00000557554 PCNX2A6NKB5 2137 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 ARL5CA6NH57 179 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 C8AP07357 584 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 CYP3A4P08684 503 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 GNAQP50148 359 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 MLLT6P55198 1093 aaPredicted RBP11.26□□□□□ -0.61
ABCD4-227ENST00000557554 UGCGQ16739 394 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 SLC5A9Q2M3M2 681 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 UVSSAQ2YD98 709 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 RTP2Q5QGT7 225 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 CATSPER4Q7RTX7 472 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 WDR5BQ86VZ2 330 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 LNX1Q8TBB1 728 aaPredicted RBP11.26□□□□□ -0.61
ABCD4-227ENST00000557554 ING5Q8WYH8 240 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 ZNF577Q9BSK1 485 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 COLEC11Q9BWP8 271 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 SMOC1Q9H4F8 434 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 ZNF334Q9HCZ1 680 aaPredicted RBP11.26□□□□□ -0.61
ABCD4-227ENST00000557554 TDRD15B5MCY1 1934 aaKnown RBP11.26□□□□□ -0.61
ABCD4-227ENST00000557554 NAV2Q8IVL1 2488 aa11.26□□□□□ -0.61
ABCD4-227ENST00000557554 TICRRQ7Z2Z1 1910 aa11.25□□□□□ -0.61
ABCD4-227ENST00000557554 CYSRT1A8MQ03 144 aa11.25□□□□□ -0.61
ABCD4-227ENST00000557554 ARNTLO00327 626 aa11.25□□□□□ -0.61
ABCD4-227ENST00000557554 ADAM12O43184 909 aa11.25□□□□□ -0.61
ABCD4-227ENST00000557554 XYLBO75191 536 aa11.25□□□□□ -0.61
ABCD4-227ENST00000557554 ZNF76P36508 570 aa11.25□□□□□ -0.61
ABCD4-227ENST00000557554 PRKCEQ02156 737 aa11.25□□□□□ -0.61
ABCD4-227ENST00000557554 CREMQ03060 361 aa11.25□□□□□ -0.61
ABCD4-227ENST00000557554 ZNF252P-AS1Q0IIN9 211 aa11.25□□□□□ -0.61
ABCD4-227ENST00000557554 SART3Q15020 963 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms