RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 NRBP2Q9NSY0 501 aa11.67□□□□□ -0.54
TRAV33-201ENST00000557514 KCNH3Q9ULD8 1083 aa11.67□□□□□ -0.54
TRAV33-201ENST00000557514 WASF3Q9UPY6 502 aa11.67□□□□□ -0.54
TRAV33-201ENST00000557514 MAN2B1O00754 1011 aa11.66□□□□□ -0.54
TRAV33-201ENST00000557514 KCNK5O95279 499 aa11.66□□□□□ -0.54
TRAV33-201ENST00000557514 PAPSS2O95340 614 aaPredicted RBP11.66□□□□□ -0.54
TRAV33-201ENST00000557514 CALM1P0DP23 149 aa11.66□□□□□ -0.54
TRAV33-201ENST00000557514 CALM2P0DP24 149 aa11.66□□□□□ -0.54
TRAV33-201ENST00000557514 CALM3P0DP25 149 aa11.66□□□□□ -0.54
TRAV33-201ENST00000557514 NCLP19338 710 aaKnown RBP11.66□□□□□ -0.54
TRAV33-201ENST00000557514 HOXA11P31270 313 aaPredicted RBP11.66□□□□□ -0.54
TRAV33-201ENST00000557514 SRSF5Q13243 272 aaKnown RBP11.66□□□□□ -0.54
TRAV33-201ENST00000557514 SF3A2Q15428 464 aaKnown RBP11.66□□□□□ -0.54
TRAV33-201ENST00000557514 USP41Q3LFD5 358 aa11.66□□□□□ -0.54
TRAV33-201ENST00000557514 CCDC82Q8N4S0 544 aa11.66□□□□□ -0.54
TRAV33-201ENST00000557514 FAM160A2Q8N612 972 aaPredicted RBP11.66□□□□□ -0.54
TRAV33-201ENST00000557514 LENG9Q96B70 501 aa11.66□□□□□ -0.54
TRAV33-201ENST00000557514 IFT122Q9HBG6 1241 aa11.66□□□□□ -0.54
TRAV33-201ENST00000557514 DISC1Q9NRI5 854 aa11.66□□□□□ -0.54
TRAV33-201ENST00000557514 NDRG2Q9UN36 371 aaKnown RBP11.66□□□□□ -0.54
TRAV33-201ENST00000557514 SAMM50Q9Y512 469 aa11.66□□□□□ -0.54
TRAV33-201ENST00000557514 HELZ2Q9BYK8 2649 aaKnown RBP11.65□□□□□ -0.54
TRAV33-201ENST00000557514 ARL5CA6NH57 179 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 CHURC1-FNTBB4DL54 471 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 hCG_1984214I3L0E3 225 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 CCL16O15467 120 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 XYLBO75191 536 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 MLH1P40692 756 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 FNTBP49356 437 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 PTH1RQ03431 593 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 GAS6Q14393 721 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 RTP2Q5QGT7 225 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 PPM1LQ5SGD2 360 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 STPG1Q5TH74 334 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 LONP2Q86WA8 852 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 RHPN2Q8IUC4 686 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 ZNF713Q8N859 430 aaPredicted RBP11.65□□□□□ -0.54
TRAV33-201ENST00000557514 SMG8Q8ND04 991 aaKnown RBP11.65□□□□□ -0.54
TRAV33-201ENST00000557514 NLRP4Q96MN2 994 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 LSM14BQ9BX40 385 aaKnown RBP11.65□□□□□ -0.54
TRAV33-201ENST00000557514 NIFKQ9BYG3 293 aaKnown RBP11.65□□□□□ -0.54
TRAV33-201ENST00000557514 PLA2G2FQ9BZM2 168 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 GLT8D2Q9H1C3 349 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 UBN1Q9NPG3 1134 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 SUCLA2Q9P2R7 463 aaPredicted RBP11.65□□□□□ -0.54
TRAV33-201ENST00000557514 AKAP13Q12802 2813 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 EVPLQ92817 2033 aa11.65□□□□□ -0.54
TRAV33-201ENST00000557514 CCDC69A6NI79 296 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 SRRM3A6NNA2 597 aaPredicted RBP11.64□□□□□ -0.55
TRAV33-201ENST00000557514 K7ESF4 209 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 PRC1O43663 620 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 FCARP24071 287 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 LIFRP42702 1097 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 CXCL12P48061 93 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 DNM2P50570 870 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 SCNN1GP51170 649 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 RING1Q06587 406 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 FUT2Q10981 343 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 MTERF2Q49AM1 385 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 PABPC1LQ4VXU2 614 aaKnown RBP11.64□□□□□ -0.55
TRAV33-201ENST00000557514 PSAPL1Q6NUJ1 521 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 CASC1Q6TDU7 716 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 PRSS55Q6UWB4 352 aaPredicted RBP11.64□□□□□ -0.55
TRAV33-201ENST00000557514 LRSAM1Q6UWE0 723 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 NFXL1Q6ZNB6 911 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 RAB11FIP4Q86YS3 637 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 KSR1Q8IVT5 923 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 TMTC2Q8N394 836 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 C12orf50Q8NA57 414 aaPredicted RBP11.64□□□□□ -0.55
TRAV33-201ENST00000557514 CNNM3Q8NE01 707 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 GATA6Q92908 595 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 ELSPBP1Q96BH3 223 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 ZFP42Q96MM3 310 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 GAD1Q99259 594 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 COLEC11Q9BWP8 271 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 ADAM33Q9BZ11 813 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 BARHL2Q9NY43 387 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 GDE1Q9NZC3 331 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
TRAV33-201ENST00000557514 ADAM28Q9UKQ2 775 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 IPPQ9Y573 584 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 MYH15Q9Y2K3 1946 aa11.64□□□□□ -0.55
TRAV33-201ENST00000557514 SF3B1O75533 1304 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRAV33-201ENST00000557514 TMEM150BA6NC51 233 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 SMCO2A6NFE2 343 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 MAFO75444 373 aaPredicted RBP11.63□□□□□ -0.55
TRAV33-201ENST00000557514 NR1I2O75469 434 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 STBD1O95210 358 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 ZNF806P0C7X5 589 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 CHRNB1P11230 501 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 SFNP31947 248 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 CIITAP33076 1130 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 JAK3P52333 1124 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 PRR16Q569H4 304 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 XKR3Q5GH77 459 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 JAKMIP3Q5VZ66 844 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 POTEHQ6S545 545 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 MICU3Q86XE3 530 aa11.63□□□□□ -0.55
TRAV33-201ENST00000557514 SMC5Q8IY18 1101 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms