RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SMCO2A6NFE2 343 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 MAGEB2O15479 319 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 NARSO43776 548 aaKnown RBP6.6□□□□□ -1.35
VPS33B-207ENST00000557470 B4GALT3O60512 393 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 N4BP1O75113 896 aaKnown RBP6.6□□□□□ -1.35
VPS33B-207ENST00000557470 LMNAP02545 664 aaKnown RBP6.6□□□□□ -1.35
VPS33B-207ENST00000557470 PSAPP07602 524 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 CTSAP10619 480 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 GPC3P51654 580 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 POLGP54098 1239 aaPredicted RBP6.6□□□□□ -1.35
VPS33B-207ENST00000557470 AP3B2Q13367 1082 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 BMS1Q14692 1282 aaKnown RBP6.6□□□□□ -1.35
VPS33B-207ENST00000557470 PTPN14Q15678 1187 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 LONRF3Q496Y0 759 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 JAKMIP3Q5VZ66 844 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 ERICH6BQ5W0A0 696 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 ZNF746Q6NUN9 644 aaPredicted RBP6.6□□□□□ -1.35
VPS33B-207ENST00000557470 OTOP3Q7RTS5 596 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 GPR149Q86SP6 731 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 DDX53Q86TM3 631 aaKnown RBP6.6□□□□□ -1.35
VPS33B-207ENST00000557470 TEX2Q8IWB9 1127 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 TMEM87AQ8NBN3 555 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 ARMC2Q8NEN0 867 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 KCNG4Q8TDN1 519 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 CRYGNQ8WXF5 182 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 PIK3R5Q8WYR1 880 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 LPPQ93052 612 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 ACSF2Q96CM8 615 aaPredicted RBP6.6□□□□□ -1.35
VPS33B-207ENST00000557470 IGSF21Q96ID5 467 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 ZFP42Q96MM3 310 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 SCLT1Q96NL6 688 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 RTP3Q9BQQ7 232 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 ZNF577Q9BSK1 485 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 C1QTNF2Q9BXJ5 285 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 ZFAND3Q9H8U3 227 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 METTL14Q9HCE5 456 aaKnown RBP6.6□□□□□ -1.35
VPS33B-207ENST00000557470 BARHL2Q9NY43 387 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 GABBR1Q9UBS5 961 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 CEP131Q9UPN4 1083 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 PCDHA10Q9Y5I2 948 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 R4GN57 208 aa6.6□□□□□ -1.35
VPS33B-207ENST00000557470 TPRP12270 2363 aaKnown RBP6.6□□□□□ -1.35
VPS33B-207ENST00000557470 KMT2BQ9UMN6 2715 aaPredicted RBP6.59□□□□□ -1.35
VPS33B-207ENST00000557470 KRBA1A5PL33 1030 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 MEIS3P2A8K0S8 358 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 SCAMP3O14828 347 aaKnown RBP6.59□□□□□ -1.35
VPS33B-207ENST00000557470 SLC27A2O14975 620 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 ADAMTS3O15072 1205 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 ZNF862O60290 1169 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 GALTP07902 379 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 CYP3A4P08684 503 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 TMOD1P28289 359 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 PHKA2P46019 1235 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 SLC11A1P49279 550 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 CLCN4P51793 760 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 SETQ01105 290 aaPredicted RBP6.59□□□□□ -1.35
VPS33B-207ENST00000557470 PRKCEQ02156 737 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 DRP2Q13474 957 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 GIT2Q14161 759 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 NR6A1Q15406 480 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 UGCGQ16739 394 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 LETM2Q2VYF4 491 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 CCDC181Q5TID7 509 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 APOA5Q6Q788 366 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 DGLUCYQ7Z3D6 616 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 SGMS1Q86VZ5 419 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 PPFIBP1Q86W92 1011 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 SMAP1Q8IYB5 467 aaPredicted RBP6.59□□□□□ -1.35
VPS33B-207ENST00000557470 KIAA2013Q8IYS2 634 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 EXOC6Q8TAG9 804 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 RSAD2Q8WXG1 361 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 RIN2Q8WYP3 895 aaPredicted RBP6.59□□□□□ -1.35
VPS33B-207ENST00000557470 ITPKCQ96DU7 683 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 FAM167AQ96KS9 214 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 GBP3Q9H0R5 595 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 NRDE2Q9H7Z3 1164 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 PRDM16Q9HAZ2 1276 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 TBC1D22BQ9NU19 505 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 TBC1D13Q9NVG8 400 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 DACT1Q9NYF0 836 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 DNAJB4Q9UDY4 337 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 TCEAL9Q9UHQ7 104 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 INPP5FQ9Y2H2 1132 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 SAMM50Q9Y512 469 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 SPTBN2O15020 2390 aa6.59□□□□□ -1.35
VPS33B-207ENST00000557470 ACACBO00763 2458 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 hCG_1984214I3L0E3 225 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 TERTO14746 1132 aaKnown RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 TPD52L2O43399 206 aaKnown RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 LZTS3O60299 673 aaPredicted RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 ZIC2O95409 532 aaPredicted RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 SSBP05455 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 NEFLP07196 543 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 CNPP09543 421 aaKnown RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 KLRC2P26717 231 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 RNASELQ05823 741 aaKnown RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 TBC1D8BQ0IIM8 1120 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 RTN1Q16799 776 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 PRR16Q569H4 304 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 NOMO2Q5JPE7 1267 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms