RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 HHIPL2Q6UWX4 724 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 RNF207Q6ZRF8 634 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 TAOK1Q7L7X3 1001 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 DAW1Q8N136 415 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 KIF2BQ8N4N8 673 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 ZNF564Q8TBZ8 553 aaPredicted RBP12.23□□□□□ -0.45
SRP54-213ENST00000556994 PLEKHO2Q8TD55 490 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 PRCCQ92733 491 aaPredicted RBP12.23□□□□□ -0.45
SRP54-213ENST00000556994 CD101Q93033 1021 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 FAM212AQ96EL1 285 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 THOC1Q96FV9 657 aaKnown RBP12.23□□□□□ -0.45
SRP54-213ENST00000556994 CRAMP1Q96RY5 1269 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 TAOK3Q9H2K8 898 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 ECT2Q9H8V3 914 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 DBNDD1Q9H9R9 158 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 AAASQ9NRG9 546 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 PI4KBQ9UBF8 816 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 FAM198AQ9UFP1 575 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 SUGT1Q9Y2Z0 365 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 PASKQ96RG2 1323 aa12.23□□□□□ -0.45
SRP54-213ENST00000556994 A0A1W2PRG0 241 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 GOLGA8IPA6NC78 632 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 GOLGA8JA6NMD2 632 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 A8MUI8 341 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 GH2P01242 217 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 CALCAP01258 141 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 GSTA1P08263 222 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 HSPA6P17066 643 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 GBP2P32456 591 aaPredicted RBP12.22□□□□□ -0.45
SRP54-213ENST00000556994 VAMP7P51809 220 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 CLNS1AP54105 237 aaKnown RBP12.22□□□□□ -0.45
SRP54-213ENST00000556994 CALCOCO2Q13137 446 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 ZKSCAN8Q15776 578 aaPredicted RBP12.22□□□□□ -0.45
SRP54-213ENST00000556994 ABCB5Q2M3G0 1257 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 BTNL9Q6UXG8 535 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 SEPT14Q6ZU15 432 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 STXBP4Q6ZWJ1 553 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 PHLDB2Q86SQ0 1253 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 PPM1KQ8N3J5 372 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 ATG4AQ8WYN0 398 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 NACC1Q96RE7 527 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 RPS6KC1Q96S38 1066 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 LXNQ9BS40 222 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 TACO1Q9BSH4 297 aaKnown RBP12.22□□□□□ -0.45
SRP54-213ENST00000556994 NSRP1Q9H0G5 558 aaKnown RBP12.22□□□□□ -0.45
SRP54-213ENST00000556994 WNT8AQ9H1J5 351 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 CCDC134Q9H6E4 229 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 DONSONQ9NYP3 566 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 TBK1Q9UHD2 729 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 PNMA3Q9UL41 463 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 MTUS1Q9ULD2 1270 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 PRR12Q9ULL5 1215 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 ARHGEF35A5YM69 484 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 TP73O15350 636 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 ECEL1O95672 775 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 HOXA10P31260 410 aaPredicted RBP12.22□□□□□ -0.45
SRP54-213ENST00000556994 VPS41P49754 854 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 PDE6CP51160 858 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 NCALDP61601 193 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 KRT17Q04695 432 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 MYO1EQ12965 1108 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 PPP2R5CQ13362 524 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 MPP2Q14168 576 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 TNIP1Q15025 636 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 KYNUQ16719 465 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 C1orf220Q5T0J3 134 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 VSTM1Q6UX27 236 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 MIGA2Q7L4E1 593 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 SP8Q8IXZ3 490 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 EPS8L1Q8TE68 723 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 AGAP11Q8TF27 550 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 MIEF2Q96C03 454 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 ZNF577Q9BSK1 485 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 TMEM109Q9BVC6 243 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 ATP6V0A4Q9HBG4 840 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 SEL1LQ9UBV2 794 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 ASIC3Q9UHC3 531 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 TRIM33Q9UPN9 1127 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 STK38LQ9Y2H1 464 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 USP15Q9Y4E8 981 aaPredicted RBP12.22□□□□□ -0.45
SRP54-213ENST00000556994 C10orf71Q711Q0 1435 aa12.22□□□□□ -0.45
SRP54-213ENST00000556994 IGF2BP3O00425 579 aaKnown RBP eCLIP12.21□□□□□ -0.45
SRP54-213ENST00000556994 ALDH5A1P51649 535 aaPredicted RBP12.21□□□□□ -0.45
SRP54-213ENST00000556994 MAP2K1Q02750 393 aaPredicted RBP12.21□□□□□ -0.45
SRP54-213ENST00000556994 RRP1BQ14684 758 aaKnown RBP12.21□□□□□ -0.45
SRP54-213ENST00000556994 TLDC1Q6P9B6 456 aa12.21□□□□□ -0.45
SRP54-213ENST00000556994 FMNL3Q8IVF7 1028 aa12.21□□□□□ -0.45
SRP54-213ENST00000556994 SLC5A5Q92911 643 aa12.21□□□□□ -0.45
SRP54-213ENST00000556994 ZNF653Q96CK0 615 aa12.21□□□□□ -0.45
SRP54-213ENST00000556994 STMN4Q9H169 189 aaPredicted RBP12.21□□□□□ -0.45
SRP54-213ENST00000556994 CHST7Q9NS84 486 aa12.21□□□□□ -0.45
SRP54-213ENST00000556994 HOMER3Q9NSC5 361 aa12.21□□□□□ -0.45
SRP54-213ENST00000556994 NOCTQ9UK39 431 aaKnown RBP12.21□□□□□ -0.45
SRP54-213ENST00000556994 ANP32DO95626 131 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 GGPS1O95749 300 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 NQO1P15559 274 aaKnown RBP12.21□□□□□ -0.46
SRP54-213ENST00000556994 GBP1P32455 592 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 ECE1P42892 770 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 CETN1Q12798 172 aa12.21□□□□□ -0.46
SRP54-213ENST00000556994 CYP1B1Q16678 543 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms