RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 SETD5Q9C0A6 1442 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 LRP6O75581 1613 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 AHDC1Q5TGY3 1603 aaPredicted RBP6.89□□□□□ -1.31
HIF1A-209ENST00000556827 COL16A1Q07092 1604 aaPredicted RBP6.88□□□□□ -1.31
HIF1A-209ENST00000556827 CDK12Q9NYV4 1490 aaPredicted RBP6.88□□□□□ -1.31
HIF1A-209ENST00000556827 METP08581 1390 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 RPGRIP1LQ68CZ1 1315 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 ELL2O00472 640 aaPredicted RBP6.88□□□□□ -1.31
HIF1A-209ENST00000556827 CYR61O00622 381 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 SLC26A4O43511 780 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 BRINP1O60477 761 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 CD40P25942 277 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 LSP1P33241 339 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 LRRC32Q14392 662 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 PTPROQ16827 1216 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 SLFN12LQ6IEE8 588 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 UNQ6494/PRO21346Q6UXR6 183 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 ZNF610Q8N9Z0 462 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 SHCBP1Q8NEM2 672 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 CSRNP2Q9H175 543 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 TMX1Q9H3N1 280 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 NELFAQ9H3P2 528 aa6.88□□□□□ -1.31
HIF1A-209ENST00000556827 TRPC5Q9UL62 973 aaPredicted RBP6.88□□□□□ -1.31
HIF1A-209ENST00000556827 APOBEC2Q9Y235 224 aaKnown RBP6.88□□□□□ -1.31
HIF1A-209ENST00000556827 MST1RQ04912 1400 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 PTPRUQ92729 1446 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 GPR39O43194 453 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 MAFO75444 373 aaPredicted RBP6.87□□□□□ -1.31
HIF1A-209ENST00000556827 PRPF6O94906 941 aaKnown RBP6.87□□□□□ -1.31
HIF1A-209ENST00000556827 ACVRL1P37023 503 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 HMGA2P52926 109 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 PHC1P78364 1004 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 HHEXQ03014 270 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 ROM1Q03395 351 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 HGFACQ04756 655 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 ADCY1Q08828 1119 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 FOXE3Q13461 319 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 Q6ZSN1 163 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 CMIPQ8IY22 773 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 ZZZ3Q8IYH5 903 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 ZNF808Q8N4W9 903 aaPredicted RBP6.87□□□□□ -1.31
HIF1A-209ENST00000556827 C7orf31Q8N865 590 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 EXTL1Q92935 676 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 TMEM176AQ96HP8 235 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 KRTAP9-8Q9BYQ0 159 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 PLA2G3Q9NZ20 509 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 GCC2Q8IWJ2 1684 aa6.87□□□□□ -1.31
HIF1A-209ENST00000556827 UNC13BO14795 1591 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 ASXL1Q8IXJ9 1541 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 ADGRL3Q9HAR2 1447 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 PNPLA6Q8IY17 1366 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 NPHP3Q7Z494 1330 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 CHD2O14647 1828 aaKnown RBP6.86□□□□□ -1.31
HIF1A-209ENST00000556827 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.86□□□□□ -1.31
HIF1A-209ENST00000556827 CPEP16870 476 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 CDK11BP21127 795 aaKnown RBP6.86□□□□□ -1.31
HIF1A-209ENST00000556827 FOXL1Q12952 345 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 ADAM15Q13444 863 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 GRM7Q14831 915 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 GPR158Q5T848 1215 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 IQSEC1Q6DN90 963 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 MAMDC4Q6UXC1 1216 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 NME9Q86XW9 330 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 PHYKPLQ8IUZ5 450 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 GPR135Q8IZ08 494 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 DDX17Q92841 729 aaKnown RBP6.86□□□□□ -1.31
HIF1A-209ENST00000556827 TLR9Q9NR96 1032 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 TOPORSQ9NS56 1045 aaPredicted RBP6.86□□□□□ -1.31
HIF1A-209ENST00000556827 SAE1Q9UBE0 346 aaPredicted RBP6.86□□□□□ -1.31
HIF1A-209ENST00000556827 MCM8Q9UJA3 840 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 VWA7Q9Y334 891 aa6.86□□□□□ -1.31
HIF1A-209ENST00000556827 NOC2LQ9Y3T9 749 aaKnown RBP6.86□□□□□ -1.31
HIF1A-209ENST00000556827 LRPPRCP42704 1394 aaKnown RBP6.85□□□□□ -1.31
HIF1A-209ENST00000556827 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.85□□□□□ -1.31
HIF1A-209ENST00000556827 NPIPB8E9PQR5 432 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 KDM1AO60341 852 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 RAB11FIP3O75154 756 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 PRKD3O94806 890 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 SLPIP03973 132 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 CLEC2LP0C7M8 214 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 SESN2P58004 480 aaPredicted RBP6.85□□□□□ -1.31
HIF1A-209ENST00000556827 PDCD1Q15116 288 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 ZBTB41Q5SVQ8 909 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 KLHDC10Q6PID8 442 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 SGMS1Q86VZ5 419 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 RASSF3Q86WH2 238 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 C1orf210Q8IVY1 113 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 D2HGDHQ8N465 521 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 PRPF38AQ8NAV1 312 aaKnown RBP6.85□□□□□ -1.31
HIF1A-209ENST00000556827 OR5AN1Q8NGI8 311 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 ORAI2Q96SN7 254 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 MRIQ9BWK5 157 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 ANO3Q9BYT9 981 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 IQGAP3Q86VI3 1631 aa6.85□□□□□ -1.31
HIF1A-209ENST00000556827 SETBP1Q9Y6X0 1596 aa6.84□□□□□ -1.31
HIF1A-209ENST00000556827 A0A1W2PRX2 142 aa6.84□□□□□ -1.31
HIF1A-209ENST00000556827 H2AFYO75367 372 aaKnown RBP6.84□□□□□ -1.31
HIF1A-209ENST00000556827 ULK1O75385 1050 aa6.84□□□□□ -1.31
HIF1A-209ENST00000556827 ACRV1P26436 265 aa6.84□□□□□ -1.31
HIF1A-209ENST00000556827 HIBADHP31937 336 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms