RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 ITGA4P13612 1032 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 NDUFA8P51970 172 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 ZNF131P52739 623 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 BCAR1P56945 870 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 PRPF4BQ13523 1007 aaKnown RBP24.74■■□□□ 1.55
PABPN1-206ENST00000556809 TJAP1Q5JTD0 557 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 SPIRE2Q8WWL2 714 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 STAMQ92783 540 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 NTPCRQ9BSD7 190 aaKnown RBP24.74■■□□□ 1.55
PABPN1-206ENST00000556809 LRRC27Q9C0I9 530 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 GOLPH3LQ9H4A5 285 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 PDZD7Q9H5P4 517 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 PARVGQ9HBI0 331 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 USP20Q9Y2K6 914 aa24.74■■□□□ 1.55
PABPN1-206ENST00000556809 NPTXRO95502 500 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 PPM1AP35813 382 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 SYKP43405 635 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 ERVFC1P60507 584 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 AMPD3Q01432 767 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 HYAL1Q12794 435 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 ZNF280BQ86YH2 543 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 CEP57L1Q8IYX8 460 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 DNAJC19Q96DA6 116 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 NXF3Q9H4D5 531 aaKnown RBP24.73■■□□□ 1.55
PABPN1-206ENST00000556809 ZHX3Q9H4I2 956 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 UBE2ZQ9H832 354 aaPredicted RBP24.73■■□□□ 1.55
PABPN1-206ENST00000556809 SPG21Q9NZD8 308 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 ARHGAP28Q9P2N2 729 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 USP25Q9UHP3 1055 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 SERTAD1Q9UHV2 236 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 VCANP13611 3396 aa24.73■■□□□ 1.55
PABPN1-206ENST00000556809 FSCN2O14926 492 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 N4BP3O15049 544 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 ACTN4O43707 911 aaKnown RBP24.72■■□□□ 1.55
PABPN1-206ENST00000556809 DDHD2O94830 711 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 SLFN14P0C7P3 912 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 SMTNP53814 917 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 NT5DC1Q5TFE4 455 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 TAS1R3Q7RTX0 852 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 MYCT1Q8N699 235 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 URGCPQ8TCY9 931 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 COL25A1Q9BXS0 654 aaPredicted RBP24.72■■□□□ 1.55
PABPN1-206ENST00000556809 TRIM6Q9C030 488 aaPredicted RBP24.72■■□□□ 1.55
PABPN1-206ENST00000556809 TMEM134Q9H6X4 195 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 TLR9Q9NR96 1032 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 KANSL3Q9P2N6 904 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 DNAJB4Q9UDY4 337 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 GIT1Q9Y2X7 761 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 PCDHGC5Q9Y5F6 944 aa24.72■■□□□ 1.55
PABPN1-206ENST00000556809 TDRD15B5MCY1 1934 aaKnown RBP24.72■■□□□ 1.55
PABPN1-206ENST00000556809 PHLPP2Q6ZVD8 1323 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 ARL5CA6NH57 179 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 K7ERI5 159 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 SLC16A4O15374 487 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 CSPG5O95196 566 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 GALTP07902 379 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 ALDH7A1P49419 539 aaKnown RBP24.71■■□□□ 1.55
PABPN1-206ENST00000556809 CTC1Q2NKJ3 1217 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 ADGRD2Q7Z7M1 963 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 TMEM173Q86WV6 379 aaPredicted RBP24.71■■□□□ 1.55
PABPN1-206ENST00000556809 TMEM87AQ8NBN3 555 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 GSTCDQ8NEC7 633 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 PABPC5Q96DU9 382 aaKnown RBP24.71■■□□□ 1.55
PABPN1-206ENST00000556809 GAD1Q99259 594 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 TRIM9Q9C026 710 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 MIOSQ9NXC5 875 aa24.71■■□□□ 1.55
PABPN1-206ENST00000556809 ZMYM2Q9UBW7 1377 aa24.7■■□□□ 1.55
PABPN1-206ENST00000556809 NT5C1B-RDH14C9J2C7 533 aa24.7■■□□□ 1.54
PABPN1-206ENST00000556809 ZC3H11AO75152 810 aaKnown RBP eCLIP24.7■■□□□ 1.54
PABPN1-206ENST00000556809 POMCP01189 267 aa24.7■■□□□ 1.54
PABPN1-206ENST00000556809 BMP1P13497 986 aa24.7■■□□□ 1.54
PABPN1-206ENST00000556809 LIG1P18858 919 aa24.7■■□□□ 1.54
PABPN1-206ENST00000556809 MLH1P40692 756 aa24.7■■□□□ 1.54
PABPN1-206ENST00000556809 AAK1Q2M2I8 961 aa24.7■■□□□ 1.54
PABPN1-206ENST00000556809 EEF1DP3Q658K8 133 aa24.7■■□□□ 1.54
PABPN1-206ENST00000556809 ZFP42Q96MM3 310 aa24.7■■□□□ 1.54
PABPN1-206ENST00000556809 CARNS1A5YM72 827 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 H0YCG3 227 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 NCK2O43639 380 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 TRAK2O60296 914 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 IDEP14735 1019 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 AKAP5P24588 427 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 GTF2F1P35269 517 aaKnown RBP eCLIP24.69■■□□□ 1.543e-12■■■■■ 53.1
PABPN1-206ENST00000556809 LTBRP36941 435 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 SLC11A1P49279 550 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 KCNQ1P51787 676 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 NCKAP1LP55160 1127 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 KRT17Q04695 432 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 RNASELQ05823 741 aaKnown RBP24.69■■□□□ 1.54
PABPN1-206ENST00000556809 PDE12Q6L8Q7 609 aaKnown RBP24.69■■□□□ 1.54
PABPN1-206ENST00000556809 HACE1Q8IYU2 909 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 TMEM161BQ8NDZ6 487 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 C7orf25Q9BPX7 421 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 APOL6Q9BWW8 343 aa24.69■■□□□ 1.54
PABPN1-206ENST00000556809 PUF60Q9UHX1 559 aaKnown RBP24.69■■□□□ 1.54
PABPN1-206ENST00000556809 TCF20Q9UGU0 1960 aaKnown RBP24.69■■□□□ 1.54
PABPN1-206ENST00000556809 FRMD3A2A2Y4 597 aa24.68■■□□□ 1.54
PABPN1-206ENST00000556809 DLL1O00548 723 aa24.68■■□□□ 1.54
PABPN1-206ENST00000556809 GAP43P17677 238 aa24.68■■□□□ 1.54
PABPN1-206ENST00000556809 AFMP43652 599 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms