RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 NCBP1Q09161 790 aaKnown RBP11.39□□□□□ -0.59
SHMT2-224ENST00000556737 PTPAQ15257 358 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 PTPN14Q15678 1187 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 NT5DC1Q5TFE4 455 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 TMEM184AQ6ZMB5 413 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 TMC7Q7Z402 723 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 CABP7Q86V35 215 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 ADHFE1Q8IWW8 467 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 VPS52Q8N1B4 723 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 KCTD17Q8N5Z5 321 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 MRPL43Q8N983 215 aaKnown RBP11.39□□□□□ -0.59
SHMT2-224ENST00000556737 SYT2Q8N9I0 419 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-224ENST00000556737 IFT74Q96LB3 600 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 AK8Q96MA6 479 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 CXCL16Q9H2A7 254 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 KANSL3Q9P2N6 904 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 PRKAG3Q9UGI9 489 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 MTMR6Q9Y217 621 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 USP15Q9Y4E8 981 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-224ENST00000556737 IRAK3Q9Y616 596 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 PDCD11Q14690 1871 aaKnown RBP11.38□□□□□ -0.59
SHMT2-224ENST00000556737 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-224ENST00000556737 ABLIM1O14639 778 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 PTGESO14684 152 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 SLC26A4O43511 780 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 CLASP2O75122 1294 aaKnown RBP11.38□□□□□ -0.59
SHMT2-224ENST00000556737 RECQL4O94761 1208 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 BMP15O95972 392 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 LIG1P18858 919 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 PDCP20941 246 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 EFNA5P52803 228 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 GRIK3Q13003 919 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 ZRSR1Q15695 479 aaKnown RBP11.38□□□□□ -0.59
SHMT2-224ENST00000556737 NAB2Q15742 525 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 ARSHQ5FYA8 562 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 LLGL2Q6P1M3 1020 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 FAM173BQ6P4H8 233 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 SYCE2Q6PIF2 218 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 HACE1Q8IYU2 909 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 GJD3Q8N144 294 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 SUSD6Q92537 303 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 DRC1Q96MC2 740 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 PLIN2Q99541 437 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 HERC2P3Q9BVR0 1158 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 NT5C3AQ9H0P0 336 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 BLOC1S4Q9NUP1 217 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 KLK14Q9P0G3 267 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 FAM50BQ9Y247 325 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 PRG3Q9Y2Y8 225 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-224ENST00000556737 HCFC2Q9Y5Z7 792 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 CLIC4Q9Y696 253 aa11.38□□□□□ -0.59
SHMT2-224ENST00000556737 LILRB3O75022 631 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 PLA2G4BP0C869 781 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 LONP1P36776 959 aaKnown RBP11.37□□□□□ -0.59
SHMT2-224ENST00000556737 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-224ENST00000556737 DMP1Q13316 513 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-224ENST00000556737 DCAF4L1Q3SXM0 396 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 ATF7IP2Q5U623 682 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 ANKRD54Q6NXT1 300 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 TIPINQ9BVW5 301 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 CDT1Q9H211 546 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 S1PR5Q9H228 398 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 PTPRHQ9HD43 1115 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 SNTG2Q9NY99 539 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 CACNG4Q9UBN1 327 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 PARP2Q9UGN5 583 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 FBXO2Q9UK22 296 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-224ENST00000556737 TNFSF13BQ9Y275 285 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 FAN1Q9Y2M0 1017 aa11.37□□□□□ -0.59
SHMT2-224ENST00000556737 NPHP3-ACAD11A0A0J9YXS1 232 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 SFI1A8K8P3 1242 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 SLC16A4O15374 487 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 CXCL14O95715 111 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 SOD2P04179 222 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 SSBP05455 408 aaKnown RBP eCLIP11.36□□□□□ -0.59
SHMT2-224ENST00000556737 PLS3P13797 630 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 EPCAMP16422 314 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 PLCG1P19174 1290 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 PROZP22891 400 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 OR1G1P47890 313 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 RAD51AP2Q09MP3 1159 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 KARSQ15046 597 aaKnown RBP11.36□□□□□ -0.59
SHMT2-224ENST00000556737 USP49Q70CQ1 688 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 TAS1R1Q7RTX1 841 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 CEP120Q8N960 986 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 TMEM161BQ8NDZ6 487 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 FEZF2Q8TBJ5 459 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 SLC22A17Q8WUG5 538 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 SPIRE2Q8WWL2 714 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 CDK5RAP3Q96JB5 506 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 FAM193BQ96PV7 902 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-224ENST00000556737 RPS6KC1Q96S38 1066 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 ACO2Q99798 780 aaKnown RBP11.36□□□□□ -0.59
SHMT2-224ENST00000556737 PAAF1Q9BRP4 392 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 ADPGKQ9BRR6 497 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 EPHX3Q9H6B9 360 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 TMEM134Q9H6X4 195 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 C17orf75Q9HAS0 396 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 C11orf16Q9NQ32 467 aa11.36□□□□□ -0.59
SHMT2-224ENST00000556737 KMT5AQ9NQR1 393 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms