RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ANO10Q9NW15 660 aa19.04■□□□□ 0.64
TUBB3-211ENST00000556536 EYSQ5T1H1 3165 aa19.04■□□□□ 0.64
TUBB3-211ENST00000556536 VCANP13611 3396 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 LTBP2Q14767 1821 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 A0A0B4J269 797 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.03■□□□□ 0.64
TUBB3-211ENST00000556536 TRIM49BA6NDI0 452 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 PDXKO00764 312 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 CLDN3O15551 220 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 CCNE1P24864 410 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 PPP1R2P41236 205 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 MATR3P43243 847 aaKnown RBP eCLIP19.03■□□□□ 0.64
TUBB3-211ENST00000556536 STX17P56962 302 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 IKBKEQ14164 716 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 TMEM240Q5SV17 173 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 ANKRD40Q6AI12 368 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 ZNF365Q70YC5 407 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 HS2ST1Q7LGA3 356 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 ZSWIM2Q8NEG5 633 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 POMGNT1Q8WZA1 660 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.03■□□□□ 0.642e-6■□□□□ 8.5
TUBB3-211ENST00000556536 DNAJC25Q9H1X3 360 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 PCIF1Q9H4Z3 704 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 TRAF3IP3Q9Y228 551 aa19.03■□□□□ 0.64
TUBB3-211ENST00000556536 C9IYK1 514 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 FGBP02675 491 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 CCDC192P0DO97 292 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 MCF2P10911 925 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 IBSPP21815 317 aaPredicted RBP19.02■□□□□ 0.64
TUBB3-211ENST00000556536 PAK1Q13153 545 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 NOLC1Q14978 699 aaKnown RBP eCLIP19.02■□□□□ 0.64
TUBB3-211ENST00000556536 SEZ6Q53EL9 994 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 ZBTB41Q5SVQ8 909 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 SLFN12LQ6IEE8 588 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 ARMCX5Q6P1M9 558 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.02■□□□□ 0.64
TUBB3-211ENST00000556536 OTOP2Q7RTS6 562 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 CEP120Q8N960 986 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 SMG8Q8ND04 991 aaKnown RBP19.02■□□□□ 0.64
TUBB3-211ENST00000556536 GUCD1Q96NT3 240 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 ADPGKQ9BRR6 497 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 MSTO1Q9BUK6 570 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 TRAIPQ9BWF2 469 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 FAM105AQ9NUU6 356 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 HES2Q9Y543 173 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 PCDHB2Q9Y5E7 798 aa19.02■□□□□ 0.64
TUBB3-211ENST00000556536 A0A0U1RQF3 1178 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 ABHD14A-ACY1A0A1B0GW23 586 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 CALUO43852 315 aaPredicted RBP19.01■□□□□ 0.63
TUBB3-211ENST00000556536 FAM189A1O60320 539 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 GARTP22102 1010 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 CYP2J2P51589 502 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 SNRPFP62306 86 aaKnown RBP19.01■□□□□ 0.63
TUBB3-211ENST00000556536 FAM189BP81408 668 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 DCAF4L1Q3SXM0 396 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 ANO6Q4KMQ2 910 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 TTI2Q6NXR4 508 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 C12orf56Q8IXR9 622 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 GOLGA5Q8TBA6 731 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 SAAL1Q96ER3 474 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 DUSP9Q99956 384 aaKnown RBP19.01■□□□□ 0.63
TUBB3-211ENST00000556536 RNF39Q9H2S5 420 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 NXF3Q9H4D5 531 aaKnown RBP19.01■□□□□ 0.63
TUBB3-211ENST00000556536 DMAC2Q9NW81 257 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 HSPBP1Q9NZL4 362 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 CGNQ9P2M7 1197 aaKnown RBP19.01■□□□□ 0.63
TUBB3-211ENST00000556536 DACH1Q9UI36 760 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 RWDD2AQ9UIY3 292 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 AGO2Q9UKV8 859 aaKnown RBP19.01■□□□□ 0.63
TUBB3-211ENST00000556536 IPPQ9Y573 584 aa19.01■□□□□ 0.63
TUBB3-211ENST00000556536 GOLGA8IPA6NC78 632 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 GOLGA8JA6NMD2 632 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 NR3C1P04150 777 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 ACTN1P12814 892 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 ATF7P17544 494 aaPredicted RBP19■□□□□ 0.63
TUBB3-211ENST00000556536 OSTNP61366 133 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 PSRC1Q6PGN9 363 aaPredicted RBP19■□□□□ 0.63
TUBB3-211ENST00000556536 FAM43BQ6ZT52 329 aaPredicted RBP19■□□□□ 0.63
TUBB3-211ENST00000556536 SLC24A5Q71RS6 500 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 ECHDC2Q86YB7 292 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 TMEM192Q8IY95 271 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 THNSL1Q8IYQ7 743 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 TSG101Q99816 390 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 TRIM6Q9C030 488 aaPredicted RBP19■□□□□ 0.63
TUBB3-211ENST00000556536 C1orf112Q9NSG2 853 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 TET1Q8NFU7 2136 aa19■□□□□ 0.63
TUBB3-211ENST00000556536 MEIS3P2A8K0S8 358 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 OGTO15294 1046 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 BAIAP3O94812 1187 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 ERCC5P28715 1186 aaPredicted RBP18.99■□□□□ 0.63
TUBB3-211ENST00000556536 TNFSF9P41273 254 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 ACOT2P49753 483 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 WDR5P61964 334 aaKnown RBP18.99■□□□□ 0.63
TUBB3-211ENST00000556536 DEFB103AP81534 67 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 LRRC63Q05C16 580 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 NFIL3Q16649 462 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 EDRF1Q3B7T1 1238 aa18.99■□□□□ 0.63
TUBB3-211ENST00000556536 APBB1IPQ7Z5R6 666 aaPredicted RBP18.99■□□□□ 0.63
TUBB3-211ENST00000556536 MRPL10Q7Z7H8 261 aaKnown RBP18.99■□□□□ 0.63
TUBB3-211ENST00000556536 ZNF598Q86UK7 904 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms