RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 GSTCDQ8NEC7 633 aa25.01■■□□□ 1.59
ACTN1-220ENST00000556433 PRIMPOLQ96LW4 560 aa25.01■■□□□ 1.59
ACTN1-220ENST00000556433 RPS6KC1Q96S38 1066 aa25.01■■□□□ 1.59
ACTN1-220ENST00000556433 FZD8Q9H461 694 aa25.01■■□□□ 1.59
ACTN1-220ENST00000556433 SFXN1Q9H9B4 322 aa25.01■■□□□ 1.59
ACTN1-220ENST00000556433 NOL7Q9UMY1 257 aaKnown RBP25.01■■□□□ 1.59
ACTN1-220ENST00000556433 TRAPPC10P48553 1259 aa25■■□□□ 1.59
ACTN1-220ENST00000556433 CDCA2Q69YH5 1023 aaPredicted RBP25■■□□□ 1.59
ACTN1-220ENST00000556433 GPR149Q86SP6 731 aa25■■□□□ 1.59
ACTN1-220ENST00000556433 FBXL6Q8N531 539 aa25■■□□□ 1.59
ACTN1-220ENST00000556433 FEZF2Q8TBJ5 459 aa25■■□□□ 1.59
ACTN1-220ENST00000556433 ASIC4Q96FT7 647 aa25■■□□□ 1.59
ACTN1-220ENST00000556433 C2orf40Q9H1Z8 148 aa25■■□□□ 1.59
ACTN1-220ENST00000556433 F8W810 466 aa24.99■■□□□ 1.59
ACTN1-220ENST00000556433 EFEMP2O95967 443 aa24.99■■□□□ 1.59
ACTN1-220ENST00000556433 GLUD2P49448 558 aa24.99■■□□□ 1.59
ACTN1-220ENST00000556433 NBR1Q14596 966 aa24.99■■□□□ 1.59
ACTN1-220ENST00000556433 FAM187BQ17R55 369 aa24.99■■□□□ 1.59
ACTN1-220ENST00000556433 ZNF318Q5VUA4 2279 aa24.99■■□□□ 1.59
ACTN1-220ENST00000556433 KIAA0319Q5VV43 1072 aa24.99■■□□□ 1.59
ACTN1-220ENST00000556433 HAUS3Q68CZ6 603 aa24.99■■□□□ 1.59
ACTN1-220ENST00000556433 RNF168Q8IYW5 571 aaPredicted RBP24.99■■□□□ 1.59
ACTN1-220ENST00000556433 C4orf32Q8N8J7 132 aa24.99■■□□□ 1.59
ACTN1-220ENST00000556433 TDRD5Q8NAT2 981 aaKnown RBP24.99■■□□□ 1.59
ACTN1-220ENST00000556433 BSNDQ8WZ55 320 aa24.99■■□□□ 1.59
ACTN1-220ENST00000556433 TRIOO75962 3097 aa24.99■■□□□ 1.59
ACTN1-220ENST00000556433 TEX28O15482 410 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 CENPBP07199 599 aaPredicted RBP24.98■■□□□ 1.59
ACTN1-220ENST00000556433 ADH1AP07327 375 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 MUTP22033 750 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 CCT6AP40227 531 aaKnown RBP24.98■■□□□ 1.59
ACTN1-220ENST00000556433 FXR2P51116 673 aaKnown RBP eCLIP24.98■■□□□ 1.59
ACTN1-220ENST00000556433 NHLH1Q02575 133 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 TMEM132AQ24JP5 1023 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 ALYREFQ86V81 257 aaKnown RBP24.98■■□□□ 1.59
ACTN1-220ENST00000556433 ZDHHC14Q8IZN3 488 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 PLCD3Q8N3E9 789 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 DEPTORQ8TB45 409 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 LRWD1Q9UFC0 647 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 LIMD1Q9UGP4 676 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 SORCS3Q9UPU3 1222 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 USTQ9Y2C2 406 aa24.98■■□□□ 1.59
ACTN1-220ENST00000556433 TTLL13PA6NNM8 815 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 N4BP3O15049 544 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 LIG1P18858 919 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 DSG1Q02413 1049 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 GRIK3Q13003 919 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 PRPF4BQ13523 1007 aaKnown RBP24.97■■□□□ 1.59
ACTN1-220ENST00000556433 ECM1Q16610 540 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 MAPK6Q16659 721 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 C8orf34Q49A92 452 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 IER5LQ5T953 404 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 RABGGTAQ92696 567 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 RXFP1Q9HBX9 757 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 POLD4Q9HCU8 107 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 MYO10Q9HD67 2058 aa24.97■■□□□ 1.59
ACTN1-220ENST00000556433 PRKCBP05771 671 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 U2AF2P26368 475 aaKnown RBP eCLIP24.96■■□□□ 1.59
ACTN1-220ENST00000556433 NAMPTP43490 491 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 MTMR3Q13615 1198 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 PDIA5Q14554 519 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 FUT10Q6P4F1 479 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 UBALD2Q8IYN6 164 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 GPR62Q9BZJ7 368 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 PDZD7Q9H5P4 517 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 MAN1C1Q9NR34 630 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 CHST7Q9NS84 486 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 KIAA1024Q9UPX6 916 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 USP20Q9Y2K6 914 aa24.96■■□□□ 1.59
ACTN1-220ENST00000556433 ZMYM2Q9UBW7 1377 aa24.95■■□□□ 1.59
ACTN1-220ENST00000556433 ACKR2O00590 384 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 TADA2AO75478 443 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 BRD1O95696 1058 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 ASGR2P07307 311 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 MYBP10242 640 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 TOB1P50616 345 aaPredicted RBP24.95■■□□□ 1.58
ACTN1-220ENST00000556433 PTGDRQ13258 359 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 PPP2R5AQ15172 486 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 USP41Q3LFD5 358 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 CCDC149Q6ZUS6 474 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 ACSF2Q96CM8 615 aaPredicted RBP24.95■■□□□ 1.58
ACTN1-220ENST00000556433 B3GALT6Q96L58 329 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 IFT74Q96LB3 600 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 BHMT2Q9H2M3 363 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 SNTG2Q9NY99 539 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 DPP7Q9UHL4 492 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 ADAM28Q9UKQ2 775 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 ZDBF2Q9HCK1 2354 aa24.95■■□□□ 1.58
ACTN1-220ENST00000556433 GLUD1P00367 558 aa24.94■■□□□ 1.58
ACTN1-220ENST00000556433 ELMSAN1Q6PJG2 1045 aa24.94■■□□□ 1.58
ACTN1-220ENST00000556433 C15orf39Q6ZRI6 1047 aa24.94■■□□□ 1.58
ACTN1-220ENST00000556433 ADPGKQ9BRR6 497 aa24.94■■□□□ 1.58
ACTN1-220ENST00000556433 CCDC113Q9H0I3 377 aa24.94■■□□□ 1.58
ACTN1-220ENST00000556433 CACNG4Q9UBN1 327 aa24.94■■□□□ 1.58
ACTN1-220ENST00000556433 PCDHB6Q9Y5E3 794 aa24.94■■□□□ 1.58
ACTN1-220ENST00000556433 STK24Q9Y6E0 443 aa24.94■■□□□ 1.58
ACTN1-220ENST00000556433 CCDC195A0A1B0GUA6 201 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 SPATA31D3P0C874 917 aa24.93■■□□□ 1.58
ACTN1-220ENST00000556433 HSP90AA2PQ14568 343 aaPredicted RBP24.93■■□□□ 1.58
ACTN1-220ENST00000556433 SPATA31D4Q6ZUB0 917 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms