RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TMEM161BQ8NDZ6 487 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 KCNN1Q92952 543 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 ZFP42Q96MM3 310 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 TMEM175Q9BSA9 504 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 MRPL4Q9BYD3 311 aaKnown RBP12.68□□□□□ -0.38
SLIRP-206ENST00000556375 GBP3Q9H0R5 595 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 DNAJB4Q9UDY4 337 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 TNFSF13BQ9Y275 285 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 USP20Q9Y2K6 914 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 TRIP11Q15643 1979 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 BDP1A6H8Y1 2624 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 PDCD11Q14690 1871 aaKnown RBP12.68□□□□□ -0.38
SLIRP-206ENST00000556375 TCF20Q9UGU0 1960 aaKnown RBP12.67□□□□□ -0.38
SLIRP-206ENST00000556375 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 NT5C1B-RDH14C9J2C7 533 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 TBCAO75347 108 aaKnown RBP12.67□□□□□ -0.38
SLIRP-206ENST00000556375 RECQL4O94761 1208 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 DDHD2O94830 711 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 FAM13AO94988 1023 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 KRT18P05783 430 aaKnown RBP12.67□□□□□ -0.38
SLIRP-206ENST00000556375 MAPTP10636 758 aaKnown RBP12.67□□□□□ -0.38
SLIRP-206ENST00000556375 SCP2P22307 547 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 KCNA5P22460 613 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 AKAP5P24588 427 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 DDIT3P35638 169 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 NCKAP1LP55160 1127 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 ERVFC1P60507 584 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 DSC1Q08554 894 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 GRIK3Q13003 919 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 CTC1Q2NKJ3 1217 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 RRAGBQ5VZM2 374 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 CCDC73Q6ZRK6 1079 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 ADGRD2Q7Z7M1 963 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 KCNG4Q8TDN1 519 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 IGSF21Q96ID5 467 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 FAM193BQ96PV7 902 aaPredicted RBP12.67□□□□□ -0.38
SLIRP-206ENST00000556375 RPS6KC1Q96S38 1066 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 ACO2Q99798 780 aaKnown RBP12.67□□□□□ -0.38
SLIRP-206ENST00000556375 TCF25Q9BQ70 676 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 PARVGQ9HBI0 331 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 NGRNQ9NPE2 291 aaKnown RBP12.67□□□□□ -0.38
SLIRP-206ENST00000556375 ENTPD7Q9NQZ7 604 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 TFIP11Q9UBB9 837 aaKnown RBP12.67□□□□□ -0.38
SLIRP-206ENST00000556375 STK39Q9UEW8 545 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 PCDHGC5Q9Y5F6 944 aa12.67□□□□□ -0.38
SLIRP-206ENST00000556375 BRD1O95696 1058 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 STAT6P42226 847 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 STRN3Q13033 797 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 GIT2Q14161 759 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 BECN1Q14457 450 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 LEXMQ3ZCV2 418 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 ZNF568Q3ZCX4 644 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 PLPP4Q5VZY2 271 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 COLGALT2Q8IYK4 626 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 EFHBQ8N7U6 833 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 GSTCDQ8NEC7 633 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 MICAL1Q8TDZ2 1067 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 BCL7CQ8WUZ0 217 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-206ENST00000556375 CDCA3Q99618 268 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-206ENST00000556375 TARS2Q9BW92 718 aaKnown RBP12.66□□□□□ -0.38
SLIRP-206ENST00000556375 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
SLIRP-206ENST00000556375 ZBP1Q9H171 429 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 CDT1Q9H211 546 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 CLDND1Q9NY35 253 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 SNTG2Q9NY99 539 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 KLK14Q9P0G3 267 aa12.66□□□□□ -0.38
SLIRP-206ENST00000556375 A0A087X0B3 334 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 K7ENM7 598 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 ABLIM1O14639 778 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 NRP1O14786 923 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 CUTAO60888 179 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 MCF2P10911 925 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 PROZP22891 400 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 ABCD1P33897 745 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 GTF2F1P35269 517 aaKnown RBP eCLIP12.65□□□□□ -0.38
SLIRP-206ENST00000556375 NRIP1P48552 1158 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 KCNQ1P51787 676 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 SMC1AQ14683 1233 aaKnown RBP12.65□□□□□ -0.38
SLIRP-206ENST00000556375 DUSP6Q16828 381 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 FOXD4L6Q3SYB3 417 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-206ENST00000556375 MPZL3Q6UWV2 235 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 FOXD4L3Q6VB84 417 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-206ENST00000556375 ZPBP2Q6X784 338 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 TMC7Q7Z402 723 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 HAUS6Q7Z4H7 955 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 DDX53Q86TM3 631 aaKnown RBP12.65□□□□□ -0.38
SLIRP-206ENST00000556375 MYCT1Q8N699 235 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 TLE6Q9H808 572 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 MARCH5Q9NX47 278 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 MIOSQ9NXC5 875 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 CFAP45Q9UL16 551 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 FAN1Q9Y2M0 1017 aa12.65□□□□□ -0.38
SLIRP-206ENST00000556375 PRG3Q9Y2Y8 225 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-206ENST00000556375 TCHHQ07283 1943 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 H3BQ06 376 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-206ENST00000556375 PTGESO14684 152 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 TRAK2O60296 914 aa12.64□□□□□ -0.39
SLIRP-206ENST00000556375 TBX10O75333 385 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms