RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 KRTAP10-2P60368 255 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 TTF1Q15361 905 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 SURF1Q15526 300 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 CCDC57Q2TAC2 916 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 DEFB115Q30KQ5 88 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 UTP14CQ5TAP6 766 aaKnown RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 FAM173BQ6P4H8 233 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 OLFM4Q6UX06 510 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 CCDC129Q6ZRS4 1044 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 FAM124AQ86V42 546 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 ZC3H18Q86VM9 953 aaKnown RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 ZNF761Q86XN6 746 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 NT5DC4Q86YG4 428 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 TRIM59Q8IWR1 403 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 AOPEPQ8N6M6 819 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 NSUN7Q8NE18 718 aaKnown RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 NCOA7Q8NI08 942 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 KIF18AQ8NI77 898 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 ZCRB1Q8TBF4 217 aaKnown RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 USP33Q8TEY7 942 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 CPLX3Q8WVH0 158 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 KAZALD1Q96I82 304 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 ZNF496Q96IT1 587 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 FGD4Q96M96 766 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 SAMD11Q96NU1 681 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 FEZ1Q99689 392 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 SPATA25Q9BR10 227 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 C1QTNF3Q9BXJ4 246 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 GTPBP4Q9BZE4 634 aaKnown RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 NKX2-4Q9H2Z4 354 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 FAM86C1Q9NVL1 165 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 ARGLU1Q9NWB6 273 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 SPATA6Q9NWH7 488 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 GULP1Q9UBP9 304 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 ARAP2Q8WZ64 1704 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 ECM29Q5VYK3 1845 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 KLF18A0A0U1RQI7 1052 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 A0A1B0GUL7 405 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 C9orf118A6NHY6 69 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 CCDC69A6NI79 296 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 C1QTNF3-AMACRE9PGA6 284 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 EYA2O00167 538 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 ZNF213O14771 459 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 PRC1O43663 620 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 MYO1BO43795 1136 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 CPP00450 1065 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 SKILP12757 684 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 CHRNA5P30532 468 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 MC3RP41968 323 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 MAGEA10P43363 369 aaPredicted RBP5□□□□□ -1.61
ATXN3-241ENST00000556374 RFX5P48382 616 aaPredicted RBP5□□□□□ -1.61
ATXN3-241ENST00000556374 CCT2P78371 535 aaKnown RBP5□□□□□ -1.61
ATXN3-241ENST00000556374 SAFBQ15424 915 aaKnown RBP eCLIP5□□□□□ -1.61
ATXN3-241ENST00000556374 PPP2R5EQ16537 467 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 DPY19L1Q2PZI1 675 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 EPHA10Q5JZY3 1008 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 ACBD5Q5T8D3 534 aaPredicted RBP5□□□□□ -1.61
ATXN3-241ENST00000556374 HHIPL2Q6UWX4 724 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 FILIP1Q7Z7B0 1213 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 CPNE8Q86YQ8 564 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 CCDC191Q8NCU4 936 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 ZNF397Q8NF99 534 aaPredicted RBP5□□□□□ -1.61
ATXN3-241ENST00000556374 ANKRD7Q92527 254 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 WASF1Q92558 559 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 APPBP2Q92624 585 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 EDC3Q96F86 508 aaKnown RBP5□□□□□ -1.61
ATXN3-241ENST00000556374 ERO1AQ96HE7 468 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 CAPNS2Q96L46 248 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 MRGPRX3Q96LB0 322 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 USP28Q96RU2 1077 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 RBM15Q96T37 977 aaKnown RBP eCLIP5□□□□□ -1.61
ATXN3-241ENST00000556374 BPIFA3Q9BQP9 254 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 NOL10Q9BSC4 688 aaKnown RBP5□□□□□ -1.61
ATXN3-241ENST00000556374 C11orf84Q9BUA3 381 aaPredicted RBP5□□□□□ -1.61
ATXN3-241ENST00000556374 LRRC2Q9BYS8 371 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 ORC3Q9UBD5 711 aaPredicted RBP5□□□□□ -1.61
ATXN3-241ENST00000556374 RCOR1Q9UKL0 485 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 ABT1Q9ULW3 272 aaKnown RBP5□□□□□ -1.61
ATXN3-241ENST00000556374 PCDHB10Q9UN67 800 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 X6R8D5 127 aa5□□□□□ -1.61
ATXN3-241ENST00000556374 RBBP6Q7Z6E9 1792 aaKnown RBP5□□□□□ -1.61
ATXN3-241ENST00000556374 ZMYM6O95789 1325 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 AKAP11Q9UKA4 1901 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 IQCA1LA6NCM1 817 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 SPTLC2O15270 562 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 AP5Z1O43299 807 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 CA12O43570 354 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 CYP7B1O75881 506 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 SLU7O95391 586 aaKnown RBP4.99□□□□□ -1.61
ATXN3-241ENST00000556374 PLATP00750 562 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 SERPINC1P01008 464 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 NTRK1P04629 796 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 SLC3A2P08195 630 aaKnown RBP4.99□□□□□ -1.61
ATXN3-241ENST00000556374 HSPD1P10809 573 aaKnown RBP4.99□□□□□ -1.61
ATXN3-241ENST00000556374 PLS3P13797 630 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 GYS1P13807 737 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 THBS2P35442 1172 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 ECE1P42892 770 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 KCNJ6P48051 423 aa4.99□□□□□ -1.61
ATXN3-241ENST00000556374 METAP2P50579 478 aaKnown RBP eCLIP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms