RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 FNBP1Q96RU3 617 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 CBWD1Q9BRT8 395 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 FAM213AQ9BRX8 229 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 CCDC94Q9BW85 323 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 MINDY3Q9H8M7 445 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 RPF1Q9H9Y2 349 aaKnown RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 CDHR5Q9HBB8 845 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 TMEM39AQ9NV64 488 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 RNF216Q9NWF9 866 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 ST3GAL5Q9UNP4 418 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 PIN4Q9Y237 131 aaKnown RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 ATP11BQ9Y2G3 1177 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 B4GALT5O43286 388 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 AKAP3O75969 853 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 ADCY5O95622 1261 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 HARSP12081 509 aaKnown RBP10.03□□□□□ -0.8
ACTN1-218ENST00000556343 PROZP22891 400 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 ADSSP30520 456 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 MNX1P50219 401 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-218ENST00000556343 RAB27AP51159 221 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 VAMP7P51809 220 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 COPB1P53618 953 aaKnown RBP10.03□□□□□ -0.8
ACTN1-218ENST00000556343 AP3M2P53677 418 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 TLE2Q04725 743 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 KRT31Q15323 416 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 AMHR2Q16671 573 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 VWA3BQ502W6 1294 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 FBXO47Q5MNV8 452 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 TCERG1LQ5VWI1 586 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 TWF2Q6IBS0 349 aaKnown RBP10.03□□□□□ -0.8
ACTN1-218ENST00000556343 LRRC8DQ7L1W4 858 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 DRC7Q8IY82 874 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 TMC2Q8TDI7 906 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 DHX38Q92620 1227 aaKnown RBP10.03□□□□□ -0.8
ACTN1-218ENST00000556343 APBB2Q92870 758 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 MRFAP1L1Q96HT8 127 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 CPB2Q96IY4 423 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 ZBTB45Q96K62 511 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-218ENST00000556343 FBXL18Q96ME1 805 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 ACAP3Q96P50 834 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 FTHL17Q9BXU8 183 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 VPS16Q9H269 839 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 PDZD7Q9H5P4 517 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 PTPRHQ9HD43 1115 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 AGPAT5Q9NUQ2 364 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 IFNKQ9P0W0 207 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 PRKAG2Q9UGJ0 569 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 NOC2LQ9Y3T9 749 aaKnown RBP10.03□□□□□ -0.8
ACTN1-218ENST00000556343 MYH11P35749 1972 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 ARID2Q68CP9 1835 aa10.03□□□□□ -0.8
ACTN1-218ENST00000556343 A0A1B0GTH6 734 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 GOLGA8IPA6NC78 632 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 GOLGA8JA6NMD2 632 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 CSDE1O75534 798 aaKnown RBP10.02□□□□□ -0.81
ACTN1-218ENST00000556343 IL18RAPO95256 599 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 AFPP02771 609 aaKnown RBP10.02□□□□□ -0.81
ACTN1-218ENST00000556343 TPM1P09493 284 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 CLTBP09497 229 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 IQCF3P0C7M6 154 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 GHRP10912 638 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 ATP1A3P13637 1013 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 FGFR4P22455 802 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 GTF2H1P32780 548 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 RFC2P35250 354 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 ZNF75DP51815 510 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 UBXN1Q04323 297 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 BFSP1Q12934 665 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 TRIM60Q495X7 471 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 DCAF17Q5H9S7 520 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-218ENST00000556343 SLC39A4Q6P5W5 647 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-218ENST00000556343 FAM228AQ86W67 206 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 IRF2BP1Q8IU81 584 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 THNSL1Q8IYQ7 743 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 DIS3LQ8TF46 1054 aaKnown RBP10.02□□□□□ -0.81
ACTN1-218ENST00000556343 CACTINQ8WUQ7 758 aaKnown RBP10.02□□□□□ -0.81
ACTN1-218ENST00000556343 PGBD4Q96DM1 585 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 IQCDQ96DY2 449 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 SAAL1Q96ER3 474 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 EEF2KMTQ96G04 330 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 MFSD14AQ96MC6 490 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 TSPAN18Q96SJ8 248 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 HSD3B7Q9H2F3 369 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 NDST4Q9H3R1 872 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 HIPK3Q9H422 1215 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 PLEKHA5Q9HAU0 1116 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 RTN4Q9NQC3 1192 aaKnown RBP10.02□□□□□ -0.81
ACTN1-218ENST00000556343 TOPORSQ9NS56 1045 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-218ENST00000556343 TAB2Q9NYJ8 693 aa10.02□□□□□ -0.81
ACTN1-218ENST00000556343 RBAKQ9NYW8 714 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-218ENST00000556343 R3HCC1Q9Y3T6 440 aaKnown RBP10.02□□□□□ -0.81
ACTN1-218ENST00000556343 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-218ENST00000556343 EVPLQ92817 2033 aa10.01□□□□□ -0.81
ACTN1-218ENST00000556343 LGALS16A8MUM7 142 aa10.01□□□□□ -0.81
ACTN1-218ENST00000556343 TISP43B9A030 160 aa10.01□□□□□ -0.81
ACTN1-218ENST00000556343 P4HA2O15460 535 aa10.01□□□□□ -0.81
ACTN1-218ENST00000556343 NPTXRO95502 500 aa10.01□□□□□ -0.81
ACTN1-218ENST00000556343 STAG3L1P0CL83 205 aa10.01□□□□□ -0.81
ACTN1-218ENST00000556343 CDC25BP30305 580 aa10.01□□□□□ -0.81
ACTN1-218ENST00000556343 HOXA11P31270 313 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms