RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 CKBP12277 381 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 LIG3P49916 1009 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 GP2P55259 537 aaKnown RBP10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 HAND2P61296 217 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 ERVK-21P61565 698 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 GHRHRQ02643 423 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 NMIQ13287 307 aaPredicted RBP10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 TCTN1Q2MV58 587 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 TRIM71Q2Q1W2 868 aaKnown RBP10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 CNKSR3Q6P9H4 555 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 SEPT14Q6ZU15 432 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 MCF2L2Q86YR7 1114 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 TBC1D10CQ8IV04 446 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 PSMG3-AS1Q96PY0 264 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 RAD9AQ99638 391 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 LRFN3Q9BTN0 628 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 CPVLQ9H3G5 476 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 RNF41Q9H4P4 317 aaPredicted RBP10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 TOMM22Q9NS69 142 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 GTF2IRD1Q9UHL9 959 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 TRIP12Q14669 1992 aaPredicted RBP10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 ABCB11O95342 1321 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 LCHNA4D1U4 455 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 FANCGO15287 622 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 GJB5O95377 273 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 GOLGA8HP0CJ92 632 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 RPS26P62854 115 aaKnown RBP10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 SEPT6Q14141 434 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 DGKDQ16760 1214 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 CYP27C1Q4G0S4 372 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 CCDC178Q5BJE1 867 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 LRRC8DQ7L1W4 858 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 ADGRF4Q8IZF3 695 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 ESR2Q92731 530 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 FAM122AQ96E09 287 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 PLPPR2Q96GM1 343 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 RMDN3Q96TC7 470 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 DUSP23Q9BVJ7 150 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 JMJD4Q9H9V9 463 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 ZSWIM5Q9P217 1185 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 HDAC6Q9UBN7 1215 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 MRPL11Q9Y3B7 192 aaKnown RBP10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 PCDHB5Q9Y5E4 795 aa10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 OAS3Q9Y6K5 1087 aaKnown RBP10.41□□□□□ -0.74
GTF2A1-204ENST00000556268 BRWD1Q9NSI6 2320 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 CCDC171Q6TFL3 1326 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 PRAMEF27A3QJZ7 478 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 PI4K2BG5E9Z4 385 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 ZNF213O14771 459 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 EFCAB14O75071 495 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 WNT11O96014 354 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 PRNPP04156 253 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 SDSP20132 328 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 KCNJ6P48051 423 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 ST13P50502 369 aaKnown RBP10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 DEFB103AP81534 67 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 CDC37Q16543 378 aaPredicted RBP10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 USH1GQ495M9 461 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 WIPI1Q5MNZ9 446 aaPredicted RBP10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 AGMOQ6ZNB7 445 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 STOX1Q6ZVD7 989 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 TMCO2Q7Z6W1 182 aaPredicted RBP10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 VSIG10LQ86VR7 867 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 SAMD3Q8N6K7 520 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 TOP6BLQ8N6T0 577 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 PPTC7Q8NI37 304 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 MTMR8Q96EF0 704 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 CRELD1Q96HD1 420 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 CD320Q9NPF0 282 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 MAP3K20Q9NYL2 800 aaKnown RBP10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 CCDC39Q9UFE4 941 aa10.4□□□□□ -0.74
GTF2A1-204ENST00000556268 LINC01553A4QN01 128 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 SORBS3O60504 671 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 F2P00734 622 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 TGFB3P10600 412 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 HSD17B4P51659 736 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 MFAP1P55081 439 aaKnown RBP10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 ZNF200P98182 395 aaPredicted RBP10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 QRICH1Q2TAL8 776 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 ASPRV1Q53RT3 343 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 ZNF618Q5T7W0 954 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 IQCA1Q86XH1 822 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 C7orf31Q8N865 590 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 TGS1Q96RS0 853 aaKnown RBP10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 PXMP2Q9NR77 195 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 VTI1BQ9UEU0 232 aa10.39□□□□□ -0.75
GTF2A1-204ENST00000556268 NEDD4P46934 1319 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 HOXC8P31273 242 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 CHMP4BP1P59074 171 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 HTRA4P83105 476 aaPredicted RBP10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 SP2Q02086 613 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 KIAA0753Q2KHM9 967 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 LEXMQ3ZCV2 418 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 TMEM31Q5JXX7 168 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 CELF3Q5SZQ8 465 aaKnown RBP10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 ARHGEF16Q5VV41 709 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 KCNV1Q6PIU1 500 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 NFXL1Q6ZNB6 911 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 CYFIP1Q7L576 1253 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 CHST3Q7LGC8 479 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms