RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	UBASH3A	P57075	661 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	FANCC	Q00597	558 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	LRRC63	Q05C16	580 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	COASY	Q13057	564 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	ALCAM	Q13740	583 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	GIT2	Q14161	759 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	GRB14	Q14449	540 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	ARHGEF6	Q15052	776 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	COBLL1	Q53SF7	1204 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	BRDT	Q58F21	947 aa	Predicted RBP	6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	FAM102B	Q5T8I3	360 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	PSAPL1	Q6NUJ1	521 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	ABHD15	Q6UXT9	468 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	TRMT1L	Q7Z2T5	733 aa	Known RBP	6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	RBBP6	Q7Z6E9	1792 aa	Known RBP	6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	FBXO16	Q8IX29	292 aa	Predicted RBP	6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	FAM178B	Q8IXR5	827 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	MICALL1	Q8N3F8	863 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	CSGALNACT2	Q8N6G5	542 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	MCPH1	Q8NEM0	835 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	MORC4	Q8TE76	937 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	EDEM1	Q92611	657 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	DNAJC19	Q96DA6	116 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	MRFAP1L1	Q96HT8	127 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	CEP170P1	Q96L14	293 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	IFT74	Q96LB3	600 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	SPATA33	Q96N06	139 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	SYNGAP1	Q96PV0	1343 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	JPH2	Q9BR39	696 aa	Predicted RBP	6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	REEP2	Q9BRK0	252 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	TINF2	Q9BSI4	451 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	ABHD16B	Q9H3Z7	469 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	THAP9	Q9H5L6	903 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	TBC1D7	Q9P0N9	293 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	DDX41	Q9UJV9	622 aa	Known RBP	6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	NAGPA	Q9UK23	515 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	PPME1	Q9Y570	386 aa		6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	GOLGB1	Q14789	3259 aa	Known RBP	6.12	□□□□□ -1.43
ATL1-208	ENST00000556067	RLF	Q13129	1914 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067		A0A0G2JMZ2	1700 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	FAM155A	B1AL88	458 aa	Predicted RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	PES1	O00541	588 aa	Known RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	USO1	O60763	962 aa	Known RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	MMP20	O60882	483 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	COBL	O75128	1261 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	HIP1R	O75146	1068 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	FARP2	O94887	1054 aa	Predicted RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	MAP3K6	O95382	1288 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	GCNT3	O95395	438 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	GNA14	O95837	355 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	SCP2	P22307	547 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	COL8A1	P27658	744 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	HOXD10	P28358	340 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	TCF7	P36402	384 aa	Predicted RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	MTIF2	P46199	727 aa	Known RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	RARRES1	P49788	294 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	DNM2	P50570	870 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	POLG	P54098	1239 aa	Predicted RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	PRKCE	Q02156	737 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	STK4	Q13043	487 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	CRHR2	Q13324	411 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	HSP90AA2P	Q14568	343 aa	Predicted RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	NCAPH	Q15003	741 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	LY6K	Q17RY6	165 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	HS1BP3	Q53T59	392 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	ARSH	Q5FYA8	562 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	ODR4	Q5SWX8	454 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	CELF3	Q5SZQ8	465 aa	Known RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	FKBP15	Q5T1M5	1219 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	UTP14C	Q5TAP6	766 aa	Known RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	IQSEC1	Q6DN90	963 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	CYP4F22	Q6NT55	531 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	C17orf99	Q6UX52	265 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	MAMDC4	Q6UXC1	1216 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	C1orf186	Q6ZWK4	172 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	HS2ST1	Q7LGA3	356 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	SFR1	Q86XK3	245 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	SYCP3	Q8IZU3	236 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	SPC24	Q8NBT2	197 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	TTC16	Q8NEE8	873 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	GOLGA5	Q8TBA6	731 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	SLC7A3	Q8WY07	619 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	KIFAP3	Q92845	792 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	TRIM11	Q96F44	468 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	MAML3	Q96JK9	1138 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	CAPNS2	Q96L46	248 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	NSUN5	Q96P11	429 aa	Known RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	RUSC1	Q9BVN2	902 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	PLVAP	Q9BX97	442 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	SRRT	Q9BXP5	876 aa	Known RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	AP5M1	Q9H0R1	490 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	SMARCAD1	Q9H4L7	1026 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	TMEM206	Q9H813	350 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	C17orf75	Q9HAS0	396 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	ATP6V0A4	Q9HBG4	840 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	IFNK	Q9P0W0	207 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	ZHX1	Q9UKY1	873 aa	Predicted RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	ZNF215	Q9UL58	517 aa	Predicted RBP	6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	EXOC7	Q9UPT5	735 aa		6.11	□□□□□ -1.43
ATL1-208	ENST00000556067	FNDC3A	Q9Y2H6	1198 aa	Known RBP	6.11	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms