RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 CLCN5P51795 746 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 AFF1P51825 1210 aaKnown RBP8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 CREMQ03060 361 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 GRIK3Q13003 919 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 MAPK6Q16659 721 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 USP41Q3LFD5 358 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 LONRF3Q496Y0 759 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 RARS2Q5T160 578 aaKnown RBP8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 HAUS3Q68CZ6 603 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 CDCA2Q69YH5 1023 aaPredicted RBP8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 CCDC149Q6ZUS6 474 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 ZBTB33Q86T24 672 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 ALYREFQ86V81 257 aaKnown RBP8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 ZBTB8OSQ8IWT0 167 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 TDRD5Q8NAT2 981 aaKnown RBP8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 KREMEN2Q8NCW0 462 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 ASAP3Q8TDY4 903 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 PIGOQ8TEQ8 1089 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 AUTS2Q8WXX7 1259 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 EIF2AQ9BY44 585 aaKnown RBP8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 RAB34Q9BZG1 259 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 GBP3Q9H0R5 595 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 TMEM60Q9H2L4 133 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 MARCH5Q9NX47 278 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 IGSF9Q9P2J2 1179 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 PHLPP2Q6ZVD8 1323 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 POTEMA6NI47 508 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 N4BP3O15049 544 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 TEX28O15482 410 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 MED24O75448 989 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 GLUD1P00367 558 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 OR52Z1P0C646 297 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 U2AF2P26368 475 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 MCM7P33993 719 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 GLUD2P49448 558 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 MRE11P49959 708 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 EFNA5P52803 228 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 ST3GAL1Q11201 340 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 ELAVL2Q12926 359 aaKnown RBP8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 TUSC3Q13454 348 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 FUT10Q6P4F1 479 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 PDXDC1Q6P996 788 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 LILRA6Q6PI73 481 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 PADI6Q6TGC4 694 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 TMC5Q6UXY8 1006 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 APBB1IPQ7Z5R6 666 aaPredicted RBP8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 C12orf76Q8N812 135 aaPredicted RBP8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 KIFAP3Q92845 792 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 CPB2Q96IY4 423 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 ADPGKQ9BRR6 497 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 APOL5Q9BWW9 433 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 POLR3FQ9H1D9 316 aaPredicted RBP8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 C17orf75Q9HAS0 396 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 WDR6Q9NNW5 1121 aaKnown RBP8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 ZDHHC7Q9NXF8 308 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 LIMD1Q9UGP4 676 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 ADAM28Q9UKQ2 775 aa8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 NOL7Q9UMY1 257 aaKnown RBP8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 ZFP37Q9Y6Q3 630 aaPredicted RBP8.61□□□□□ -1.03
PTCSC3-201ENST00000556013 CACNA1HO95180 2353 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 CCDC195A0A1B0GUA6 201 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 ARHGEF35A5YM69 484 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 LRRIQ4A6NIV6 560 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 WNT7AO00755 349 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 USO1O60763 962 aaKnown RBP8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 TADA2AO75478 443 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 THP07101 528 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 MLH1P40692 756 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 PRPHP41219 470 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 SCNN1GP51170 649 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 TCF15Q12870 199 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 PRPF4BQ13523 1007 aaKnown RBP8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 TDGQ13569 410 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 ZNF174Q15697 407 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 UVSSAQ2YD98 709 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 DCAF4L1Q3SXM0 396 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 IER5LQ5T953 404 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 TAS1R1Q7RTX1 841 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 NOSTRINQ8IVI9 506 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 C4orf32Q8N8J7 132 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 IGSF22Q8N9C0 903 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 FAM184AQ8NB25 1140 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 PRSS33Q8NF86 280 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 IFT74Q96LB3 600 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 ZFP42Q96MM3 310 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 TMEM134Q9H6X4 195 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 TSHZ2Q9NRE2 1034 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 BMP2KQ9NSY1 1161 aaPredicted RBP8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 WNT16Q9UBV4 365 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 PARP2Q9UGN5 583 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 PRG3Q9Y2Y8 225 aaPredicted RBP8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 KIF3AQ9Y496 699 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 RBM19Q9Y4C8 960 aaKnown RBP8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 HES2Q9Y543 173 aa8.6□□□□□ -1.03
PTCSC3-201ENST00000556013 SF3B1O75533 1304 aaKnown RBP eCLIP8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 SPDYE4A6NLX3 237 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 PROB1E7EW31 1015 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 TMEM189-UBE2V1I3L0A0 370 aa8.59□□□□□ -1.03
PTCSC3-201ENST00000556013 B4GALT5O43286 388 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms