RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 CSDE1O75534 798 aaKnown RBP4.31□□□□□ -1.72
LINC00648-202ENST00000555985 PIGRP01833 764 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 RB1P06400 928 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 MAPTP10636 758 aaKnown RBP4.31□□□□□ -1.72
LINC00648-202ENST00000555985 SFPQP23246 707 aaKnown RBP eCLIP4.31□□□□□ -1.72
LINC00648-202ENST00000555985 BMPR1AP36894 532 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 DNM2P50570 870 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 EHHADHQ08426 723 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 DSC1Q08554 894 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 BMS1Q14692 1282 aaKnown RBP4.31□□□□□ -1.72
LINC00648-202ENST00000555985 CCDC183Q5T5S1 534 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 FAM102BQ5T8I3 360 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 NT5DC1Q5TFE4 455 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 FBXO38Q6PIJ6 1188 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 SYT10Q6XYQ8 523 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 SPNS2Q8IVW8 549 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 TMEM192Q8IY95 271 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 SNX29Q8TEQ0 813 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 RAD54LQ92698 747 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 KIFAP3Q92845 792 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 DNAJC19Q96DA6 116 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 C16orf45Q96MC5 204 aaPredicted RBP4.31□□□□□ -1.72
LINC00648-202ENST00000555985 NT5C3AQ9H0P0 336 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 BHMT2Q9H2M3 363 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 PRDM12Q9H4Q4 367 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 PDZD7Q9H5P4 517 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 C17orf75Q9HAS0 396 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 FAM105AQ9NUU6 356 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 RCOR1Q9UKL0 485 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 VWA8A3KMH1 1905 aa4.31□□□□□ -1.72
LINC00648-202ENST00000555985 VCANP13611 3396 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 VWA3AA6NCI4 1184 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 MYO1CO00159 1063 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 B4GALT5O43286 388 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 ARF4P18085 180 aaPredicted RBP4.3□□□□□ -1.72
LINC00648-202ENST00000555985 ATP2B1P20020 1258 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 SCP2P22307 547 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 RAB27AP51159 221 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 MCCD1P59942 119 aaPredicted RBP4.3□□□□□ -1.72
LINC00648-202ENST00000555985 PLCB3Q01970 1234 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 GIT2Q14161 759 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 CTC1Q2NKJ3 1217 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 SHC4Q6S5L8 630 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 CABP7Q86V35 215 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 TXLNBQ8N3L3 684 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 RNF149Q8NC42 400 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 TMEM161BQ8NDZ6 487 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 NLRP7Q8WX94 980 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 EPSTI1Q96J88 318 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 PPP1R16BQ96T49 567 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 VN1R3Q9BXE9 311 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 EIF2AQ9BY44 585 aaKnown RBP4.3□□□□□ -1.72
LINC00648-202ENST00000555985 RAB34Q9BZG1 259 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 INO80BQ9C086 356 aaPredicted RBP4.3□□□□□ -1.72
LINC00648-202ENST00000555985 HAPLN2Q9GZV7 340 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 TMEM117Q9H0C3 514 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 LMAN2LQ9H0V9 348 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 SLC28A3Q9HAS3 691 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 HCSTQ9UBK5 93 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 ODF2LQ9ULJ1 636 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 LZTS1Q9Y250 596 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 HPSEQ9Y251 543 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 RWDD3Q9Y3V2 267 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 VPS37CA5D8V6 355 aaPredicted RBP4.3□□□□□ -1.72
LINC00648-202ENST00000555985 RFXAPO00287 272 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 ACKR2O00590 384 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 USO1O60763 962 aaKnown RBP4.3□□□□□ -1.72
LINC00648-202ENST00000555985 LILRB3O75022 631 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 HIP1RO75146 1068 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 PLA2G4BP0C869 781 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 STAG3L1P0CL83 205 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 FGFR1P11362 822 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 PLCG1P19174 1290 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 NPTX2P47972 431 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 GYS2P54840 703 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 FOXK1P85037 733 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 TFDP1Q14186 410 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 RESP18Q5W5W9 173 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 KRT79Q5XKE5 535 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 CD300LGQ6UXG3 332 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 PHLPP2Q6ZVD8 1323 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 C10orf67Q8IYJ2 551 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 MYOCDQ8IZQ8 938 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 COLGALT1Q8NBJ5 622 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 SPC24Q8NBT2 197 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 SPPL3Q8TCT6 385 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 TMEM174Q8WUU8 243 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 BCL7CQ8WUZ0 217 aaPredicted RBP4.3□□□□□ -1.72
LINC00648-202ENST00000555985 SYMPKQ92797 1274 aaKnown RBP4.3□□□□□ -1.72
LINC00648-202ENST00000555985 MRPL38Q96DV4 380 aaKnown RBP4.3□□□□□ -1.72
LINC00648-202ENST00000555985 ZNF668Q96K58 619 aaPredicted RBP4.3□□□□□ -1.72
LINC00648-202ENST00000555985 CLIC6Q96NY7 704 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 FUCA2Q9BTY2 467 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 CXCL16Q9H2A7 254 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 KBTBD4Q9NVX7 518 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 DACT1Q9NYF0 836 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 STK17AQ9UEE5 414 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 DNM3Q9UQ16 869 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 IPPQ9Y573 584 aa4.3□□□□□ -1.72
LINC00648-202ENST00000555985 PCDHB2Q9Y5E7 798 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms