RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 WDR11Q9BZH6 1224 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 RIOX1Q9H6W3 641 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 SYNPO2LQ9H987 977 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 CYP4F11Q9HBI6 524 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 DKK2Q9UBU2 259 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 CLCA2Q9UQC9 943 aa5.86□□□□□ -1.47
SCFD1-217ENST00000555953 GAGE12BA1L429 117 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 GAGE12HA6NDE8 117 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 ZNF185O15231 689 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 TAP1Q03518 808 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 BEAN1Q3B7T3 259 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 PITRM1Q5JRX3 1037 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 BROXQ5VW32 411 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 DRICH1Q6PGQ1 229 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-217ENST00000555953 AHI1Q8N157 1196 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 OR14C36Q8NHC7 312 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 RSAD2Q8WXG1 361 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 DRC1Q96MC2 740 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 CDC5LQ99459 802 aaKnown RBP5.85□□□□□ -1.47
SCFD1-217ENST00000555953 EMC7Q9NPA0 242 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 TNFRSF18Q9Y5U5 241 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 PCSK5Q92824 1860 aa5.85□□□□□ -1.47
SCFD1-217ENST00000555953 ZAR1LA6NP61 321 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 ITGA10O75578 1167 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 MEF2AQ02078 507 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-217ENST00000555953 DDB1Q16531 1140 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 PDCD4Q53EL6 469 aaKnown RBP5.84□□□□□ -1.47
SCFD1-217ENST00000555953 C19orf54Q5BKX5 351 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 DALRD3Q5D0E6 543 aaKnown RBP5.84□□□□□ -1.47
SCFD1-217ENST00000555953 C11orf74Q86VG3 221 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 PLXDC1Q8IUK5 500 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 RNF169Q8NCN4 708 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 MDM1Q8TC05 714 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 NTN5Q8WTR8 489 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-217ENST00000555953 SNX33Q8WV41 574 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 SLC5A5Q92911 643 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 KCTD10Q9H3F6 313 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 SYBUQ9NX95 663 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 CDY2AQ9Y6F7 541 aa5.84□□□□□ -1.47
SCFD1-217ENST00000555953 B5MCH6 92 aa5.83□□□□□ -1.48
SCFD1-217ENST00000555953 RAB11FIP3O75154 756 aa5.83□□□□□ -1.48
SCFD1-217ENST00000555953 CDC45O75419 566 aa5.83□□□□□ -1.48
SCFD1-217ENST00000555953 LPLP06858 475 aa5.83□□□□□ -1.48
SCFD1-217ENST00000555953 USP14P54578 494 aa5.83□□□□□ -1.48
SCFD1-217ENST00000555953 CCDC142Q17RM4 750 aa5.83□□□□□ -1.48
SCFD1-217ENST00000555953 CPEB3Q8NE35 698 aaKnown RBP5.83□□□□□ -1.48
SCFD1-217ENST00000555953 MFSD3Q96ES6 412 aa5.83□□□□□ -1.48
SCFD1-217ENST00000555953 CEP95Q96GE4 821 aa5.83□□□□□ -1.48
SCFD1-217ENST00000555953 ZNF764Q96H86 408 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-217ENST00000555953 BBC3Q96PG8 261 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-217ENST00000555953 FEZ1Q99689 392 aa5.83□□□□□ -1.48
SCFD1-217ENST00000555953 GPRC5DQ9NZD1 345 aa5.83□□□□□ -1.48
SCFD1-217ENST00000555953 PLAAQ9Y263 795 aa5.83□□□□□ -1.48
SCFD1-217ENST00000555953 TBKBP1A7MCY6 615 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 GSG1L2A8MUP6 293 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 DIRC3C9JPN6 131 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 KIAA0355O15063 1070 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 CTSSP25774 331 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 CANXP27824 592 aaKnown RBP5.82□□□□□ -1.48
SCFD1-217ENST00000555953 BMPR1AP36894 532 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 CLK3P49761 638 aaKnown RBP5.82□□□□□ -1.48
SCFD1-217ENST00000555953 LGALS4P56470 323 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 BMT2Q1RMZ1 405 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 CT83Q5H943 113 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 MFSD14BQ5SR56 506 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 METRNLQ641Q3 311 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 EFCAB12Q6NXP0 572 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 ADGRG3Q86Y34 549 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 CMTR2Q8IYT2 770 aaKnown RBP5.82□□□□□ -1.48
SCFD1-217ENST00000555953 SUPT20HQ8NEM7 779 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 TFAP2CQ92754 450 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 ADAM2Q99965 735 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 POGKQ9P215 609 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 PTGFRNQ9P2B2 879 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 KCNG1Q9UIX4 513 aa5.82□□□□□ -1.48
SCFD1-217ENST00000555953 NOC2LQ9Y3T9 749 aaKnown RBP5.82□□□□□ -1.48
SCFD1-217ENST00000555953 MRPL42Q9Y6G3 142 aaKnown RBP5.82□□□□□ -1.48
SCFD1-217ENST00000555953 UNC119BA6NIH7 251 aa5.81□□□□□ -1.48
SCFD1-217ENST00000555953 RBP3P10745 1247 aa5.81□□□□□ -1.48
SCFD1-217ENST00000555953 IL12RB1P42701 662 aa5.81□□□□□ -1.48
SCFD1-217ENST00000555953 PDCD1Q15116 288 aa5.81□□□□□ -1.48
SCFD1-217ENST00000555953 PRAMEF14Q5SWL7 426 aa5.81□□□□□ -1.48
SCFD1-217ENST00000555953 FAM102AQ5T9C2 384 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-217ENST00000555953 RASSF3Q86WH2 238 aa5.81□□□□□ -1.48
SCFD1-217ENST00000555953 LCORLQ8N3X6 602 aa5.81□□□□□ -1.48
SCFD1-217ENST00000555953 LEO1Q8WVC0 666 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-217ENST00000555953 LINC00476Q8WZB0 136 aa5.81□□□□□ -1.48
SCFD1-217ENST00000555953 NEU1Q99519 415 aa5.81□□□□□ -1.48
SCFD1-217ENST00000555953 PRDM13Q9H4Q3 707 aa5.81□□□□□ -1.48
SCFD1-217ENST00000555953 EPN1Q9Y6I3 576 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-217ENST00000555953 MARCH11A6NNE9 402 aa5.8□□□□□ -1.48
SCFD1-217ENST00000555953 ADCY6O43306 1168 aa5.8□□□□□ -1.48
SCFD1-217ENST00000555953 TYRP1P17643 537 aa5.8□□□□□ -1.48
SCFD1-217ENST00000555953 DDX6P26196 483 aaKnown RBP eCLIP5.8□□□□□ -1.48
SCFD1-217ENST00000555953 MGAT1P26572 445 aa5.8□□□□□ -1.48
SCFD1-217ENST00000555953 GUCY1B3Q02153 619 aa5.8□□□□□ -1.48
SCFD1-217ENST00000555953 TP53BP2Q13625 1128 aa5.8□□□□□ -1.48
SCFD1-217ENST00000555953 ATP13A4Q4VNC1 1196 aa5.8□□□□□ -1.48
SCFD1-217ENST00000555953 STRIP1Q5VSL9 837 aa5.8□□□□□ -1.48
SCFD1-217ENST00000555953 JAZF1Q86VZ6 243 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms