RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 TOM1L1O75674 476 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 CXCL8P10145 99 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 HOXD8P13378 290 aaPredicted RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 CD52P31358 61 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 POLR2FP61218 127 aaKnown RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 BFSP1Q12934 665 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 SNX17Q15036 470 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 PAWRQ96IZ0 340 aaKnown RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 CELF4Q9BZC1 486 aaKnown RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 NOC2LQ9Y3T9 749 aaKnown RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 B4GALT4O60513 344 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 NOLC1Q14978 699 aaKnown RBP eCLIP11.08□□□□□ -0.64
NEK9-205ENST00000555405 EXOC3L4Q17RC7 722 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 MIIPQ5JXC2 388 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 SLFN12LQ6IEE8 588 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 RRAGAQ7L523 313 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 APTXQ7Z2E3 356 aaKnown RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 DEFB128Q7Z7B8 93 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 TRIM59Q8IWR1 403 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 CACTINQ8WUQ7 758 aaKnown RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 EIF2AQ9BY44 585 aaKnown RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 UPF3AQ9H1J1 476 aaKnown RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 GCNT4Q9P109 453 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 MGAMO43451 1857 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 PDE4DIPQ5VU43 2346 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 COL1A2P08123 1366 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 PHLPP2Q6ZVD8 1323 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 IGHA2P01877 340 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 PNMA6AP0CW24 399 aaPredicted RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 GUCY2FP51841 1108 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 CBWD6Q4V339 395 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 COBLL1Q53SF7 1204 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 CBWD3Q5JTY5 395 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 CBWD5Q5RIA9 395 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 TAF2Q6P1X5 1199 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 FBXO46Q6PJ61 603 aaPredicted RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 STRA6Q9BX79 667 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 CDT1Q9H211 546 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 RPF1Q9H9Y2 349 aaKnown RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 AGPAT5Q9NUQ2 364 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 TRMT1Q9NXH9 659 aaKnown RBP11.08□□□□□ -0.64
NEK9-205ENST00000555405 SNTG2Q9NY99 539 aa11.08□□□□□ -0.64
NEK9-205ENST00000555405 DARSP14868 501 aaKnown RBP11.07□□□□□ -0.64
NEK9-205ENST00000555405 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
NEK9-205ENST00000555405 MRPS6P82932 125 aaKnown RBP11.07□□□□□ -0.64
NEK9-205ENST00000555405 PPP3CAQ08209 521 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 ZNF618Q5T7W0 954 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 FRMD5Q7Z6J6 570 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 PLEKHO2Q8TD55 490 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 RABGGTAQ92696 567 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 SLC35C1Q96A29 364 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 SCLYQ96I15 445 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 SPAG5Q96R06 1193 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 TMEM134Q9H6X4 195 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 ST3GAL5Q9UNP4 418 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 INPP5FQ9Y2H2 1132 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 RNF225M0QZC1 329 aaPredicted RBP11.07□□□□□ -0.64
NEK9-205ENST00000555405 MXI1P50539 228 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 WNT7BP56706 349 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 MYL7Q01449 175 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 MPZL3Q6UWV2 235 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 INTS8Q75QN2 995 aaKnown RBP11.07□□□□□ -0.64
NEK9-205ENST00000555405 FZD8Q9H461 694 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 LUC7L2Q9Y383 392 aaKnown RBP11.07□□□□□ -0.64
NEK9-205ENST00000555405 MYO9BQ13459 2157 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 UBE4BO95155 1302 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 TTC26A0AVF1 554 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 MOXD2PA6NHM9 499 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 EPHB6O15197 1021 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 GPR32O75388 356 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 STAG3L1P0CL83 205 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 ZSCAN20P17040 1043 aaPredicted RBP11.07□□□□□ -0.64
NEK9-205ENST00000555405 CETN1Q12798 172 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 CCSAPQ6IQ19 270 aaPredicted RBP11.07□□□□□ -0.64
NEK9-205ENST00000555405 PPM1KQ8N3J5 372 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 PPP1R9BQ96SB3 815 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 ADAMTS10Q9H324 1103 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 ST6GALNAC4Q9H4F1 302 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 AGO3Q9H9G7 860 aaKnown RBP11.07□□□□□ -0.64
NEK9-205ENST00000555405 SEPT11Q9NVA2 429 aaKnown RBP11.07□□□□□ -0.64
NEK9-205ENST00000555405 PPME1Q9Y570 386 aa11.07□□□□□ -0.64
NEK9-205ENST00000555405 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.07□□□□□ -0.64
NEK9-205ENST00000555405 MBLAC1A4D2B0 266 aaPredicted RBP11.06□□□□□ -0.64
NEK9-205ENST00000555405 AKR1B15C9JRZ8 316 aaPredicted RBP11.06□□□□□ -0.64
NEK9-205ENST00000555405 OGTO15294 1046 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 EXTL3O43909 919 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 TSPAN1O60635 241 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 TMEM191BP0C7N4 346 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 FMO5P49326 533 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 TDRD12Q587J7 1177 aaKnown RBP11.06□□□□□ -0.64
NEK9-205ENST00000555405 GBP6Q6ZN66 633 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 LPPQ93052 612 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 HVCN1Q96D96 273 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 DMAC2Q9NW81 257 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 WDR81Q562E7 1941 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 A0A0B4J269 797 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 A0A0U1RQG5 324 aaPredicted RBP11.06□□□□□ -0.64
NEK9-205ENST00000555405 ARVCFO00192 962 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 NRDCO43847 1150 aa11.06□□□□□ -0.64
NEK9-205ENST00000555405 CABYRO75952 493 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms