RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 SPATA31C1P0DKV0 1188 aa17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 XRCC6P12956 609 aaKnown RBP eCLIP17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 GLUD2P49448 558 aa17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 NCBP1Q09161 790 aaKnown RBP17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 CCDC149Q6ZUS6 474 aa17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 OTOP3Q7RTS5 596 aa17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 RHOBTB2Q9BYZ6 727 aa17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 POLR3FQ9H1D9 316 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 MAN1C1Q9NR34 630 aa17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 CHST7Q9NS84 486 aa17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 SSX2IPQ9Y2D8 614 aa17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 DMXL1Q9Y485 3027 aa17.41■□□□□ 0.38
ARHGEF40-205ENST00000555052 A0A087WWV3 80 aa17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 A0A1B0GUA9 196 aa17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 USO1O60763 962 aaKnown RBP17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 PAPLNO95428 1278 aa17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 NEK4P51957 841 aa17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 FOSBP53539 338 aa17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 DSG1Q02413 1049 aa17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 CDCA2Q69YH5 1023 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 SLC27A1Q6PCB7 646 aa17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 ACSF2Q96CM8 615 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 CCDC43Q96MW1 224 aaKnown RBP17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 APOL6Q9BWW8 343 aa17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 TRIM6Q9C030 488 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 GPRC5CQ9NQ84 441 aa17.4■□□□□ 0.38
ARHGEF40-205ENST00000555052 MTCL1Q9Y4B5 1905 aaKnown RBP17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 SPDYE4A6NLX3 237 aa17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 GALR2O43603 387 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 NPTXRO95502 500 aa17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 GLUD1P00367 558 aa17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 NEFLP07196 543 aa17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 AKAP5P24588 427 aa17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 TRIM29Q14134 588 aa17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 CDR2LQ86X02 465 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 GPR65Q8IYL9 337 aa17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 HACE1Q8IYU2 909 aa17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 TMEM105Q8N8V8 129 aa17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 FAM86C1Q9NVL1 165 aa17.39■□□□□ 0.37
ARHGEF40-205ENST00000555052 DCHS1Q96JQ0 3298 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 N4BP1O75113 896 aaKnown RBP17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 MED24O75448 989 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 C1RP00736 705 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 GRIK3Q13003 919 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 FUT10Q6P4F1 479 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 CYP26C1Q6V0L0 522 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 CATSPER3Q86XQ3 398 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 MCPH1Q8NEM0 835 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 PRIMPOLQ96LW4 560 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 COLEC11Q9BWP8 271 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 GPR62Q9BZJ7 368 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 IRF2BPLQ9H1B7 796 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 FZD8Q9H461 694 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 TUFT1Q9NNX1 390 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 DOCK6Q96HP0 2047 aa17.38■□□□□ 0.37
ARHGEF40-205ENST00000555052 CACNA1AO00555 2505 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 LRRIQ4A6NIV6 560 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 NR1I2O75469 434 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 RFPL2O75678 378 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 MCM7P33993 719 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 FAM187BQ17R55 369 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 ASTLQ6HA08 431 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 HDAC7Q8WUI4 952 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 ZNF707Q96C28 371 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 B3GALT6Q96L58 329 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 POLR3CQ9BUI4 534 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 KCNK12Q9HB15 430 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 WDR6Q9NNW5 1121 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 PRMT7Q9NVM4 692 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 PPP4R2Q9NY27 417 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 DPP7Q9UHL4 492 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 ADAM28Q9UKQ2 775 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 DUSP12Q9UNI6 340 aa17.37■□□□□ 0.37
ARHGEF40-205ENST00000555052 CCDC195A0A1B0GUA6 201 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 TTLL13PA6NNM8 815 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 H0Y858 1186 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 TDGQ13569 410 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 USP41Q3LFD5 358 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 CWF19L1Q69YN2 538 aaKnown RBP17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 ELMSAN1Q6PJG2 1045 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 POTEGQ6S5H5 508 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 MAEAQ7L5Y9 396 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 BSNDQ8WZ55 320 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 ATOH1Q92858 354 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 NACC1Q96RE7 527 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 PDZD7Q9H5P4 517 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 KLK14Q9P0G3 267 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 FNIP2Q9P278 1114 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 CLUHO75153 1309 aa17.36■□□□□ 0.37
ARHGEF40-205ENST00000555052 TGM5O43548 720 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 ATP2B1P20020 1258 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 RPA1P27694 616 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 CLCN5P51795 746 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 GUCY1B3Q02153 619 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 ORC2Q13416 577 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 LILRA6Q6PI73 481 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 ZBTB8OSQ8IWT0 167 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 PAAF1Q9BRP4 392 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms