RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CASP5P51878 434 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 SEZ6Q53EL9 994 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 NOMO2Q5JPE7 1267 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 GLB1LQ6UWU2 654 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 HAUS6Q7Z4H7 955 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 ZBTB33Q86T24 672 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 LRRC43Q8N309 656 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 GLIS3Q8NEA6 775 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 PGBD4Q96DM1 585 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 SAMD11Q96NU1 681 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 TRIM6Q9C030 488 aaPredicted RBP13.58□□□□□ -0.24
SYNE2-214ENST00000554928 GBP3Q9H0R5 595 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 BLZF1Q9H2G9 400 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 KBTBD4Q9NVX7 518 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 CACNG4Q9UBN1 327 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 SERTAD1Q9UHV2 236 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 KCNH3Q9ULD8 1083 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 HPSEQ9Y251 543 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 RBM19Q9Y4C8 960 aaKnown RBP13.58□□□□□ -0.24
SYNE2-214ENST00000554928 FRMD3A2A2Y4 597 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 ARL5CA6NH57 179 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 F8W810 466 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 MYBP10242 640 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 HARSP12081 509 aaKnown RBP13.57□□□□□ -0.24
SYNE2-214ENST00000554928 IDEP14735 1019 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 POU3F3P20264 500 aaPredicted RBP13.57□□□□□ -0.24
SYNE2-214ENST00000554928 PROZP22891 400 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 CMA1P23946 247 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 IRS1P35568 1242 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 NDUFA8P51970 172 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 OSTNP61366 133 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 NCBP1Q09161 790 aaKnown RBP13.57□□□□□ -0.24
SYNE2-214ENST00000554928 KCNA1Q09470 495 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 ADALQ6DHV7 355 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 SLC39A4Q6P5W5 647 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 KCNT2Q6UVM3 1135 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 TMEM130Q8N3G9 435 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 IQUBQ8NA54 791 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 SPPL3Q8TCT6 385 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 MRPL4Q9BYD3 311 aaKnown RBP13.57□□□□□ -0.24
SYNE2-214ENST00000554928 TRIM9Q9C026 710 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 FAM13BQ9NYF5 915 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 LARSQ9P2J5 1176 aaKnown RBP13.57□□□□□ -0.24
SYNE2-214ENST00000554928 PARP2Q9UGN5 583 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 TNFSF13BQ9Y275 285 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 GDAQ9Y2T3 454 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 ATP6V1DQ9Y5K8 247 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 PRRC2BQ5JSZ5 2229 aaKnown RBP13.57□□□□□ -0.24
SYNE2-214ENST00000554928 NLRC5Q86WI3 1866 aa13.57□□□□□ -0.24
SYNE2-214ENST00000554928 ANKRD63C9JTQ0 380 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 PTGESO14684 152 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 INPPL1O15357 1258 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 ZC3H11AO75152 810 aaKnown RBP eCLIP13.56□□□□□ -0.24
SYNE2-214ENST00000554928 PPP1R37O75864 691 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 FGF18O76093 207 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 RECQL4O94761 1208 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 RB1P06400 928 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 AFMP43652 599 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 SLC11A1P49279 550 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 SMTNP53814 917 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 BCAR1P56945 870 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 CUL4BQ13620 913 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 ZNF568Q3ZCX4 644 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 ZBTB41Q5SVQ8 909 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 FAM178BQ8IXR5 827 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 FSIP1Q8NA03 581 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 RABGGTAQ92696 567 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 C11orf84Q9BUA3 381 aaPredicted RBP13.56□□□□□ -0.24
SYNE2-214ENST00000554928 STRA6Q9BX79 667 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 SCAND2PQ9GZW5 306 aaPredicted RBP13.56□□□□□ -0.24
SYNE2-214ENST00000554928 TNMDQ9H2S6 317 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 PANK4Q9NVE7 773 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 TBX20Q9UMR3 447 aa13.56□□□□□ -0.24
SYNE2-214ENST00000554928 RALGAPA2Q2PPJ7 1873 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 FAM237AA0A1B0GTK4 181 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 GALTP07902 379 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 LAG3P18627 525 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 IGFBP6P24592 240 aaPredicted RBP13.55□□□□□ -0.24
SYNE2-214ENST00000554928 ANP32AP39687 249 aaKnown RBP13.55□□□□□ -0.24
SYNE2-214ENST00000554928 GTF2BQ00403 316 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 STRN3Q13033 797 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 COASYQ13057 564 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 HERC4Q5GLZ8 1057 aaPredicted RBP13.55□□□□□ -0.24
SYNE2-214ENST00000554928 MPZL3Q6UWV2 235 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 ZNF720Q7Z2F6 126 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 THNSL1Q8IYQ7 743 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 SLC39A11Q8N1S5 342 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 CNNM3Q8NE01 707 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 POF1BQ8WVV4 589 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 KCNN1Q92952 543 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 P2RX5Q93086 422 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 MRPL38Q96DV4 380 aaKnown RBP13.55□□□□□ -0.24
SYNE2-214ENST00000554928 ZNF558Q96NG5 402 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 PLVAPQ9BX97 442 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 VN1R3Q9BXE9 311 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 MRPL9Q9BYD2 267 aaKnown RBP13.55□□□□□ -0.24
SYNE2-214ENST00000554928 TSHZ2Q9NRE2 1034 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 GIT1Q9Y2X7 761 aa13.55□□□□□ -0.24
SYNE2-214ENST00000554928 RWDD3Q9Y3V2 267 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms