RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 OS9Q13438 667 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-203ENST00000554636 TTC39AQ5SRH9 613 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 C20orf194Q5TEA3 1177 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 SPTY2D1Q68D10 685 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-203ENST00000554636 DENND5AQ6IQ26 1287 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 ZFPM1Q8IX07 1006 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 LINC01356Q8N9X3 169 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 SLC43A3Q8NBI5 491 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 KREMEN2Q8NCW0 462 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 RCBTB1Q8NDN9 531 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 FNIP1Q8TF40 1166 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 BRI3BPQ8WY22 251 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 NSUN4Q96CB9 384 aaKnown RBP5.06□□□□□ -1.6
VTI1B-203ENST00000554636 EAF2Q96CJ1 260 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-203ENST00000554636 OPTNQ96CV9 577 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 DDX11Q96FC9 970 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 C20orf173Q96LM9 149 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 NOX5Q96PH1 765 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 WRNIP1Q96S55 665 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 PTPN18Q99952 460 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 IER2Q9BTL4 223 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 IDI2Q9BXS1 227 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 ZNF341Q9BYN7 854 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 TRIM55Q9BYV6 548 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 CCDC8Q9H0W5 538 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-203ENST00000554636 ADAM7Q9H2U9 754 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 R3HDMLQ9H3Y0 253 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 IGSF5Q9NSI5 407 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 ZBTB40Q9NUA8 1239 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 USP40Q9NVE5 1235 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 ZNF112Q9UJU3 913 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 EXOC6BQ9Y2D4 811 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 PHIPQ8WWQ0 1821 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 SGSM2O43147 1006 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 KLF4O43474 513 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 ENTPD3O75355 529 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 CPP00450 1065 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 KCNAB2Q13303 367 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 PPIL2Q13356 520 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 SMAD4Q13485 552 aaKnown RBP5.05□□□□□ -1.6
VTI1B-203ENST00000554636 SLC9A5Q14940 896 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 NAALADL2Q58DX5 795 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 GORABQ5T7V8 394 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 E4F1Q66K89 784 aaPredicted RBP5.05□□□□□ -1.6
VTI1B-203ENST00000554636 IQCEQ6IPM2 695 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 USP53Q70EK8 1073 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 MIGA2Q7L4E1 593 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 MILR1Q7Z6M3 343 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 CTU1Q7Z7A3 348 aaKnown RBP5.05□□□□□ -1.6
VTI1B-203ENST00000554636 ADGRA1Q86SQ6 560 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 STK32CQ86UX6 486 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 FAM26EQ8N5C1 309 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 TP53I13Q8NBR0 393 aaPredicted RBP5.05□□□□□ -1.6
VTI1B-203ENST00000554636 ZKSCAN4Q969J2 545 aaPredicted RBP5.05□□□□□ -1.6
VTI1B-203ENST00000554636 ZBTB8AQ96BR9 441 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 HOOK2Q96ED9 719 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 TMEM169Q96HH4 297 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 SPATA25Q9BR10 227 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 PIH1D3Q9NQM4 214 aaKnown RBP5.05□□□□□ -1.6
VTI1B-203ENST00000554636 PALD1Q9ULE6 856 aa5.05□□□□□ -1.6
VTI1B-203ENST00000554636 DDX60LQ5H9U9 1706 aaKnown RBP5.05□□□□□ -1.6
VTI1B-203ENST00000554636 ZSWIM8A7E2V4 1837 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 ATAD5Q96QE3 1844 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 CCL15-CCL14A0A0B4J2E2 113 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 DDTLA6NHG4 134 aaPredicted RBP5.04□□□□□ -1.6
VTI1B-203ENST00000554636 KRTAP9-7A8MTY7 169 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 STK10O94804 968 aaKnown RBP5.04□□□□□ -1.6
VTI1B-203ENST00000554636 SCG5P05408 212 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 C8BP07358 591 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 CYP2C8P10632 490 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 LTBRP36941 435 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 STAT5AP42229 794 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 INHBEP58166 350 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 GSTO1P78417 241 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 CAP1Q01518 475 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 CACNB2Q08289 660 aaPredicted RBP5.04□□□□□ -1.6
VTI1B-203ENST00000554636 CRHR2Q13324 411 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 PICALMQ13492 652 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 MOGSQ13724 837 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 CCL15Q16663 113 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 VWA3BQ502W6 1294 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 CCDC158Q5M9N0 1113 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 CD300LDQ6UXZ3 194 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 ETV3LQ6ZN32 361 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 B3GNT8Q7Z7M8 397 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 AACSQ86V21 672 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 ERO1BQ86YB8 467 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 ERC1Q8IUD2 1116 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 RPAP2Q8IXW5 612 aaPredicted RBP5.04□□□□□ -1.6
VTI1B-203ENST00000554636 FAM43AQ8N2R8 423 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 KCTD13Q8WZ19 329 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 KIF1BPQ96EK5 621 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 C1orf159Q96HA4 380 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 CCDC140Q96MF4 163 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 XYLT2Q9H1B5 865 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 IL1RAPL2Q9NP60 686 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 CLDND1Q9NY35 253 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 RAI14Q9P0K7 980 aa5.04□□□□□ -1.6
VTI1B-203ENST00000554636 COA3Q9Y2R0 106 aaPredicted RBP5.04□□□□□ -1.6
VTI1B-203ENST00000554636 LOC285556D6RIA3 1793 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms