RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SPDYE4A6NLX3 237 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 FZD9O00144 591 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 PGRMC1O00264 195 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 USO1O60763 962 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 TOM1O60784 492 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 CNMDO75829 334 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 VNN1O95497 513 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ITGB5P18084 799 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 L1CAMP32004 1257 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 PSMC2P35998 433 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 TECP42680 631 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 CARSP49589 748 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 CDR2Q01850 454 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 SLC18A2Q05940 514 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 C2orf54Q08AI8 447 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 KIF5AQ12840 1032 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 DNAJC3Q13217 504 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 TEX35Q5T0J7 233 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 PLA2G4FQ68DD2 849 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 RSBN1LQ6PCB5 846 aaPredicted RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 TRIM72Q6ZMU5 477 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 INTS8Q75QN2 995 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 C14orf37Q86TY3 774 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 NBPF5PQ86XG9 351 aaPredicted RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 NCAPG2Q86XI2 1143 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ANKRD20A12PQ8NF67 263 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 SLC35B2Q8TB61 432 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 RASGRP4Q8TDF6 673 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ALG3Q92685 438 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 RNPC3Q96LT9 517 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 TSG101Q99816 390 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 AGPAT1Q99943 283 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 PACSIN1Q9BY11 444 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF518BQ9C0D4 1074 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 INTS2Q9H0H0 1204 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 SSX2IPQ9Y2D8 614 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ANKRD33BA6NCL7 494 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 A6NHS1 94 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 RIPK2O43353 540 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ALDH1A2O94788 518 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 UFL1O94874 794 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 GSRP00390 522 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ITGAVP06756 1048 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ETV4P43268 484 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 AFMP43652 599 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 RARRES1P49788 294 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 NEK3P51956 506 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 AP3M2P53677 418 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 NAPAP54920 295 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 INCA1Q0VD86 236 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 PRPF4BQ13523 1007 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 CNGA2Q16280 664 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ACAD10Q6JQN1 1059 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 CKAP2Q8WWK9 683 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 PPM1EQ8WY54 764 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 CCDC28BQ9BUN5 200 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 PSTPIP2Q9H939 334 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ZDHHC7Q9NXF8 308 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 DDX20Q9UHI6 824 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 STARD13Q9Y3M8 1113 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 TRIM64CA6NLI5 447 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 SIN3BO75182 1162 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF189O75820 626 aaPredicted RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ATP4AP20648 1035 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 HOXA13P31271 388 aaPredicted RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 FLT3P36888 993 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 CCT6AP40227 531 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 UBA7P41226 1012 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 JAK3P52333 1124 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 SLC25A11Q02978 314 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 AUHQ13825 339 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 HNRNPDQ14103 355 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ZACNQ401N2 412 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 SH2D4BQ5SQS7 431 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 RBM26Q5T8P6 1007 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 KRT79Q5XKE5 535 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ALKAL1Q6UXT8 129 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 BICDL1Q6ZP65 573 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 GLYCTKQ8IVS8 523 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 DHX37Q8IY37 1157 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 NEK11Q8NG66 645 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF516Q92618 1163 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 TEKT1Q969V4 418 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 FAM136AQ96C01 138 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ARHGEF26Q96DR7 871 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 MRRFQ96E11 262 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ALS2CR12Q96Q35 445 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 NACC1Q96RE7 527 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 IWS1Q96ST2 819 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 DDX47Q9H0S4 455 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ARHGEF4Q9NR80 690 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 TBC1D22BQ9NU19 505 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 PPP1R9AQ9ULJ8 1098 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 TRPC6Q9Y210 931 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 LRRC42Q9Y546 428 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 POTEB3A0JP26 581 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 BCLAF3A2AJT9 711 aaKnown RBP3.72□□□□□ -1.81
SEC23A-207ENST00000554615 POTECB2RU33 542 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 AKR1B10O60218 316 aa3.72□□□□□ -1.81
SEC23A-207ENST00000554615 ASMTLO95671 621 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms