RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SGSM3Q96HU1 749 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 FCRL2Q96LA5 508 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-228ENST00000554592 NEUROD6Q96NK8 337 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 FEZ1Q99689 392 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 SLC12A9Q9BXP2 914 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 MOV10L1Q9BXT6 1211 aaKnown RBP5.89□□□□□ -1.47
ATXN3-228ENST00000554592 KIAA1683Q9H0B3 1180 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 GBP3Q9H0R5 595 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 PRDM12Q9H4Q4 367 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 MROH8Q9H579 483 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 DNAJC18Q9H819 358 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 FANCLQ9NW38 375 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 TMEM260Q9NX78 707 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 AATFQ9NY61 560 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATXN3-228ENST00000554592 WHRNQ9P202 907 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 MSRAQ9UJ68 235 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 PALD1Q9ULE6 856 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 PA2G4Q9UQ80 394 aaKnown RBP5.89□□□□□ -1.47
ATXN3-228ENST00000554592 ALPK3Q96L96 1907 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 MGAMO43451 1857 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 SSU72P8A0A1W2PR75 194 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 PPM1BO75688 479 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 TSPAN15O95858 294 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 GSNP06396 782 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 UQCRFS1P1P0C7P4 283 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 VCAM1P19320 739 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 HSD3B2P26439 372 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 TFCP2Q12800 502 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 RAB30Q15771 203 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 SHROOM1Q2M3G4 852 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-228ENST00000554592 FAM47AQ5JRC9 791 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 TMEM240Q5SV17 173 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 NAA16Q6N069 864 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-228ENST00000554592 TATDN1Q6P1N9 297 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 SYDE1Q6ZW31 735 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-228ENST00000554592 C16orf59Q7L2K0 433 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 LRRC47Q8N1G4 583 aaKnown RBP5.88□□□□□ -1.47
ATXN3-228ENST00000554592 BVESQ8NE79 360 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 ADCY4Q8NFM4 1077 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 NUP133Q8WUM0 1156 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 BRF1Q92994 677 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 PPP1R14AQ96A00 147 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 INTS4Q96HW7 963 aaKnown RBP5.88□□□□□ -1.47
ATXN3-228ENST00000554592 PLCD4Q9BRC7 762 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 LRFN3Q9BTN0 628 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 SPATC1LQ9H0A9 340 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 RPAP3Q9H6T3 665 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-228ENST00000554592 ZNF552Q9H707 407 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-228ENST00000554592 CABP5Q9NP86 173 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 XPNPEP3Q9NQH7 507 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 ARHGEF4Q9NR80 690 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 AP5S1Q9NUS5 200 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 TNFRSF10DQ9UBN6 386 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 GPR160Q9UJ42 338 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 FHOD1Q9Y613 1164 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 FLT1P17948 1338 aa5.88□□□□□ -1.47
ATXN3-228ENST00000554592 DOCK3Q8IZD9 2030 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 MYOCOSA0A1B0GUC4 107 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 A0A1W2PQ45 241 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-228ENST00000554592 A0A1W2PQY0 241 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 DBX1A6NMT0 343 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 GRXCR1A8MXD5 290 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 H0Y8X5 98 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 AGRPO00253 132 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 TBX1O43435 398 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 PGK1P00558 417 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 CAPNS1P04632 268 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 MED14OSP0DP75 135 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 FCER1AP12319 257 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 ITGA4P13612 1032 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 KIR3DS1Q14943 382 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 ABCB5Q2M3G0 1257 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 CERKLQ49MI3 558 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-228ENST00000554592 TMEM31Q5JXX7 168 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 CEP128Q6ZU80 1094 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 SLCO6A1Q86UG4 719 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 ZNF227Q86WZ6 799 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 TMEM199Q8N511 208 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 MB21D1Q8N884 522 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 ACER1Q8TDN7 264 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 SSH1Q8WYL5 1049 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 HERVK_113Q902F9 699 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 RCC1LQ96I51 464 aaKnown RBP5.87□□□□□ -1.47
ATXN3-228ENST00000554592 MAML3Q96JK9 1138 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 MRGPRX3Q96LB0 322 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 SLC38A3Q99624 504 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 SLC6A17Q9H1V8 727 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 EPB41L4BQ9H329 900 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 EPHX3Q9H6B9 360 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 SLC28A3Q9HAS3 691 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 DCP1AQ9NPI6 582 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-228ENST00000554592 STARD7Q9NQZ5 370 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 SAP30BPQ9UHR5 308 aaKnown RBP5.87□□□□□ -1.47
ATXN3-228ENST00000554592 SERPINB13Q9UIV8 391 aa5.87□□□□□ -1.47
ATXN3-228ENST00000554592 DIS3Q9Y2L1 958 aaKnown RBP5.87□□□□□ -1.47
ATXN3-228ENST00000554592 ARID1BQ8NFD5 2236 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-228ENST00000554592 ELP1O95163 1332 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 MROH7Q68CQ1 1323 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 ERC2O15083 957 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms