RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 INTS4Q96HW7 963 aaKnown RBP9.62□□□□□ -0.87
ACTN1-213ENST00000554508 CDK5RAP3Q96JB5 506 aa9.62□□□□□ -0.87
ACTN1-213ENST00000554508 DRC1Q96MC2 740 aa9.62□□□□□ -0.87
ACTN1-213ENST00000554508 MMTAG2Q9BU76 263 aaKnown RBP9.62□□□□□ -0.87
ACTN1-213ENST00000554508 COLEC11Q9BWP8 271 aa9.62□□□□□ -0.87
ACTN1-213ENST00000554508 APOL6Q9BWW8 343 aa9.62□□□□□ -0.87
ACTN1-213ENST00000554508 NXF3Q9H4D5 531 aaKnown RBP9.62□□□□□ -0.87
ACTN1-213ENST00000554508 EPHX3Q9H6B9 360 aa9.62□□□□□ -0.87
ACTN1-213ENST00000554508 TMEM134Q9H6X4 195 aa9.62□□□□□ -0.87
ACTN1-213ENST00000554508 FOXD4L1Q9NU39 408 aa9.62□□□□□ -0.87
ACTN1-213ENST00000554508 KCND2Q9NZV8 630 aa9.62□□□□□ -0.87
ACTN1-213ENST00000554508 PARP2Q9UGN5 583 aa9.62□□□□□ -0.87
ACTN1-213ENST00000554508 RBM19Q9Y4C8 960 aaKnown RBP9.62□□□□□ -0.87
ACTN1-213ENST00000554508 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-213ENST00000554508 B4GALT3O60512 393 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 SOD2P04179 222 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 AKAP5P24588 427 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 GUCY2CP25092 1073 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 SCNN1GP51170 649 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 PEX3P56589 373 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 GRIK3Q13003 919 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 DMP1Q13316 513 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-213ENST00000554508 ZRSR1Q15695 479 aaKnown RBP9.61□□□□□ -0.87
ACTN1-213ENST00000554508 DCAF4L1Q3SXM0 396 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 LLGL2Q6P1M3 1020 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 SYT2Q8N9I0 419 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-213ENST00000554508 BCL7CQ8WUZ0 217 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-213ENST00000554508 SUSD6Q92537 303 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 CALML4Q96GE6 196 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 ZFP42Q96MM3 310 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 PNMA5Q96PV4 448 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 RPS6KC1Q96S38 1066 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 NTPCRQ9BSD7 190 aaKnown RBP9.61□□□□□ -0.87
ACTN1-213ENST00000554508 PHF7Q9BWX1 381 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-213ENST00000554508 EMILIN2Q9BXX0 1053 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 S1PR5Q9H228 398 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 PDZD7Q9H5P4 517 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 POLD4Q9HCU8 107 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 MRPL17Q9NRX2 175 aaKnown RBP9.61□□□□□ -0.87
ACTN1-213ENST00000554508 TNFSF13BQ9Y275 285 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 USP15Q9Y4E8 981 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-213ENST00000554508 HCFC2Q9Y5Z7 792 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 C5orf42Q9H799 3197 aa9.61□□□□□ -0.87
ACTN1-213ENST00000554508 TTLL13PA6NNM8 815 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 CCDC169A6NNP5 214 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 LOC730098B7Z3J9 87 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 GPR37L1O60883 481 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 LILRB3O75022 631 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 HIP1RO75146 1068 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 THP07101 528 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 LIG1P18858 919 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 LONP1P36776 959 aaKnown RBP9.6□□□□□ -0.87
ACTN1-213ENST00000554508 UBA7P41226 1012 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 NPTX2P47972 431 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 SMTNP53814 917 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 RBM10P98175 930 aaKnown RBP9.6□□□□□ -0.87
ACTN1-213ENST00000554508 ITIH3Q06033 890 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 BECN1Q14457 450 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 PTPN14Q15678 1187 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 TMEM31Q5JXX7 168 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 NT5DC1Q5TFE4 455 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 ATF7IP2Q5U623 682 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 CES5AQ6NT32 575 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 SYCE2Q6PIF2 218 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 KCNK18Q7Z418 384 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 CABP7Q86V35 215 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 DAW1Q8N136 415 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 SPRYD3Q8NCJ5 442 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 GSTCDQ8NEC7 633 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 SLC22A17Q8WUG5 538 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 SPIRE2Q8WWL2 714 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 AUTS2Q8WXX7 1259 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 KHSRPQ92945 711 aaKnown RBP eCLIP9.6□□□□□ -0.87
ACTN1-213ENST00000554508 KLHL5Q96PQ7 755 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 RUSC1Q9BVN2 902 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 HERC2P3Q9BVR0 1158 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 VN1R3Q9BXE9 311 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 KMT5AQ9NQR1 393 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 DZANK1Q9NVP4 752 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 MARCH5Q9NX47 278 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 SNTG2Q9NY99 539 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 KLK14Q9P0G3 267 aa9.6□□□□□ -0.87
ACTN1-213ENST00000554508 PRG3Q9Y2Y8 225 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-213ENST00000554508 VPS37CA5D8V6 355 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-213ENST00000554508 DCXO43602 365 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 TADA2AO75478 443 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 EFEMP2O95967 443 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 C1RP00736 705 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 EDN1P05305 212 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 SSBP05455 408 aaKnown RBP eCLIP9.59□□□□□ -0.87
ACTN1-213ENST00000554508 URODP06132 367 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 PLA2G4BP0C869 781 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 SYT1P21579 422 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 KLRC2P26717 231 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 SLC12A3P55017 1021 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 TUSC3Q13454 348 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 CBX2Q14781 532 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-213ENST00000554508 SF3A1Q15459 793 aaKnown RBP9.59□□□□□ -0.87
ACTN1-213ENST00000554508 USP41Q3LFD5 358 aa9.59□□□□□ -0.87
ACTN1-213ENST00000554508 TMEM119Q4V9L6 283 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms