RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 LRRC26Q2I0M4 334 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 CEP135Q66GS9 1140 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 SLC39A4Q6P5W5 647 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 INTS8Q75QN2 995 aaKnown RBP15.82■□□□□ 0.12
SHMT2-210ENST00000553950 FRMD5Q7Z6J6 570 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 FAM186BQ8IYM0 893 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 ABHD8Q96I13 439 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 CBWD1Q9BRT8 395 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 PDZD7Q9H5P4 517 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 ERVK-5Q9HDB9 667 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 TMEM39AQ9NV64 488 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 FANCLQ9NW38 375 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-210ENST00000553950 PRKAG2Q9UGJ0 569 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 NOC2LQ9Y3T9 749 aaKnown RBP15.82■□□□□ 0.12
SHMT2-210ENST00000553950 ANKRD63C9JTQ0 380 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 B4GALT5O43286 388 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 CBFA2T2O43439 604 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 STX10O60499 249 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 IQCF3P0C7M6 154 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 MTIF2P46199 727 aaKnown RBP15.81■□□□□ 0.12
SHMT2-210ENST00000553950 SCN5AQ14524 2016 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 LPIN1Q14693 890 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 LTBP2Q14767 1821 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 FILIP1LQ4L180 1135 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 TCP11X2Q5H9J9 407 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 ANP32BQ92688 251 aaKnown RBP15.81■□□□□ 0.12
SHMT2-210ENST00000553950 FBXL18Q96ME1 805 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 MED15Q96RN5 788 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 CCDC94Q9BW85 323 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-210ENST00000553950 IFIH1Q9BYX4 1025 aaKnown RBP15.81■□□□□ 0.12
SHMT2-210ENST00000553950 CDT1Q9H211 546 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 GRPEL1Q9HAV7 217 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 CDHR5Q9HBB8 845 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 PTPRHQ9HD43 1115 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 ARMCX3Q9UH62 379 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-210ENST00000553950 ST3GAL5Q9UNP4 418 aa15.81■□□□□ 0.12
SHMT2-210ENST00000553950 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-210ENST00000553950 ZNF233A6NK53 670 aa15.8■□□□□ 0.12
SHMT2-210ENST00000553950 KIAA0355O15063 1070 aa15.8■□□□□ 0.12
SHMT2-210ENST00000553950 EDN1P05305 212 aa15.8■□□□□ 0.12
SHMT2-210ENST00000553950 PFKMP08237 780 aa15.8■□□□□ 0.12
SHMT2-210ENST00000553950 ADSSP30520 456 aa15.8■□□□□ 0.12
SHMT2-210ENST00000553950 NFX1Q12986 1120 aaKnown RBP15.8■□□□□ 0.12
SHMT2-210ENST00000553950 SURF1Q15526 300 aa15.8■□□□□ 0.12
SHMT2-210ENST00000553950 SNRNP35Q16560 246 aaKnown RBP15.8■□□□□ 0.12
SHMT2-210ENST00000553950 TWF2Q6IBS0 349 aaKnown RBP15.8■□□□□ 0.12
SHMT2-210ENST00000553950 TRAF7Q6Q0C0 670 aa15.8■□□□□ 0.12
SHMT2-210ENST00000553950 SARM1Q6SZW1 724 aa15.8■□□□□ 0.12
SHMT2-210ENST00000553950 SEPT8Q92599 483 aa15.8■□□□□ 0.12
SHMT2-210ENST00000553950 TRAIPQ9BWF2 469 aa15.8■□□□□ 0.12
SHMT2-210ENST00000553950 SAMSN1Q9NSI8 373 aaKnown RBP15.8■□□□□ 0.12
SHMT2-210ENST00000553950 PADI3Q9ULW8 664 aa15.8■□□□□ 0.12
SHMT2-210ENST00000553950 TISP43B9A030 160 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 ABLIM1O14639 778 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 N4BP1O75113 896 aaKnown RBP15.79■□□□□ 0.12
SHMT2-210ENST00000553950 CSDE1O75534 798 aaKnown RBP15.79■□□□□ 0.12
SHMT2-210ENST00000553950 SERPINC1P01008 464 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 CLTAP09496 248 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 HARSP12081 509 aaKnown RBP15.79■□□□□ 0.12
SHMT2-210ENST00000553950 FGFR4P22455 802 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 CD52P31358 61 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 GRM5P41594 1212 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 BFSP1Q12934 665 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 MAN2A1Q16706 1144 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 CPB2Q96IY4 423 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 PCIF1Q9H4Z3 704 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 PRDM5Q9NQX1 630 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-210ENST00000553950 TOPORSQ9NS56 1045 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-210ENST00000553950 C1orf112Q9NSG2 853 aa15.79■□□□□ 0.12
SHMT2-210ENST00000553950 RBAKQ9NYW8 714 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-210ENST00000553950 LIMA1Q9UHB6 759 aaKnown RBP15.79■□□□□ 0.12
SHMT2-210ENST00000553950 AKAP3O75969 853 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 IL18RAPO95256 599 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 CXCL10P02778 98 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 RAG1P15918 1043 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 HOXA11P31270 313 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-210ENST00000553950 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
SHMT2-210ENST00000553950 ZBTB33Q86T24 672 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 BRSK2Q8IWQ3 736 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 CD302Q8IX05 232 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 TMEM199Q8N511 208 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 TMC2Q8TDI7 906 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 RSPH1Q8WYR4 309 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 SAAL1Q96ER3 474 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 TSPAN18Q96SJ8 248 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 FAM213AQ9BRX8 229 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 PPP1R12CQ9BZL4 782 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 HSD3B7Q9H2F3 369 aa15.78■□□□□ 0.12
SHMT2-210ENST00000553950 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.78■□□□□ 0.12
SHMT2-210ENST00000553950 EFCAB14O75071 495 aa15.77■□□□□ 0.12
SHMT2-210ENST00000553950 NPTXRO95502 500 aa15.77■□□□□ 0.12
SHMT2-210ENST00000553950 TIMP1P01033 207 aa15.77■□□□□ 0.12
SHMT2-210ENST00000553950 AP3M2P53677 418 aa15.77■□□□□ 0.12
SHMT2-210ENST00000553950 CYP24A1Q07973 514 aa15.77■□□□□ 0.12
SHMT2-210ENST00000553950 PSMD6Q15008 389 aa15.77■□□□□ 0.12
SHMT2-210ENST00000553950 PLEKHG4Q58EX7 1191 aa15.77■□□□□ 0.12
SHMT2-210ENST00000553950 FKBP15Q5T1M5 1219 aa15.77■□□□□ 0.12
SHMT2-210ENST00000553950 EEF1DP3Q658K8 133 aa15.77■□□□□ 0.12
SHMT2-210ENST00000553950 NT5DC4Q86YG4 428 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms