RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 P4HA2O15460 535 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 TBC1D12O60347 775 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 MAPTP10636 758 aaKnown RBP15.66■□□□□ 0.1
ACTN1-211ENST00000553882 KCNJ1P48048 391 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 DHX34Q14147 1143 aaKnown RBP15.66■□□□□ 0.1
ACTN1-211ENST00000553882 PGM5Q15124 567 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 SEL1L2Q5TEA6 688 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 MCF2L2Q86YR7 1114 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 C12orf56Q8IXR9 622 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 TAS1R2Q8TE23 839 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 RMDN3Q96TC7 470 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 TXLNGYQ9BZA5 131 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 LOXHD1Q8IVV2 1947 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 PFASO15067 1338 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 DENND3A2RUS2 1198 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 CYP11B1P15538 503 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 NPTX2P47972 431 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 PEX5P50542 639 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 PMS2P54278 862 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 HADHBP55084 474 aaKnown RBP15.66■□□□□ 0.1
ACTN1-211ENST00000553882 SP4Q02446 784 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 QPCTQ16769 361 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 PSMD1Q99460 953 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 PI4K2AQ9BTU6 479 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 DEFB129Q9H1M3 183 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 RASAL2Q9UJF2 1139 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 PNMA2Q9UL42 364 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 TBX20Q9UMR3 447 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 CAPN7Q9Y6W3 813 aa15.66■□□□□ 0.1
ACTN1-211ENST00000553882 GMNCA6NCL1 334 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 SORBS3O60504 671 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 PTGIRP43119 386 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 PPP2R5EQ16537 467 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 AGBL2Q5U5Z8 902 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 PHLDB2Q86SQ0 1253 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 CCDC105Q8IYK2 499 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 TMEM161BQ8NDZ6 487 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 TBC1D22BQ9NU19 505 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 GRHL1Q9NZI5 618 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 FAM187AA6NFU0 413 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 TRAPPC3O43617 180 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 CPP00450 1065 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 FGFR4P22455 802 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 MFAP3P55082 362 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 NCKAP1LP55160 1127 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 PSMC5P62195 406 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 DMP1Q13316 513 aaPredicted RBP15.65■□□□□ 0.1
ACTN1-211ENST00000553882 SLC29A2Q14542 456 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 DENND2CQ68D51 928 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 KRT39Q6A163 491 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 ANO5Q75V66 913 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 NIPA1Q7RTP0 329 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 TTLL6Q8N841 843 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 PARD3BQ8TEW8 1205 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 BSNDQ8WZ55 320 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 SHC3Q92529 594 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 RAPGEF5Q92565 580 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 RNF25Q96BH1 459 aaPredicted RBP15.65■□□□□ 0.1
ACTN1-211ENST00000553882 PABPC3Q9H361 631 aaKnown RBP15.65■□□□□ 0.1
ACTN1-211ENST00000553882 SEMA4AQ9H3S1 761 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 SLC38A10Q9HBR0 1119 aa15.65■□□□□ 0.1
ACTN1-211ENST00000553882 KRT5P13647 590 aa15.64■□□□□ 0.1
ACTN1-211ENST00000553882 CHRNA3P32297 505 aa15.64■□□□□ 0.1
ACTN1-211ENST00000553882 SLCO1A2P46721 670 aa15.64■□□□□ 0.1
ACTN1-211ENST00000553882 PDE6CP51160 858 aa15.64■□□□□ 0.1
ACTN1-211ENST00000553882 SF3A3Q12874 501 aaKnown RBP eCLIP15.64■□□□□ 0.13e-8■■■■■ 42
ACTN1-211ENST00000553882 FAM83AQ86UY5 434 aa15.64■□□□□ 0.1
ACTN1-211ENST00000553882 C4orf19Q8IY42 314 aa15.64■□□□□ 0.1
ACTN1-211ENST00000553882 WNK4Q96J92 1243 aa15.64■□□□□ 0.1
ACTN1-211ENST00000553882 TELO2Q9Y4R8 837 aa15.64■□□□□ 0.1
ACTN1-211ENST00000553882 PHF20L1A8MW92 1017 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 WDR64B1ANS9 1081 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 WDR46O15213 610 aaKnown RBP15.64■□□□□ 0.09
ACTN1-211ENST00000553882 GZMAP12544 262 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 SMTNP53814 917 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 C2CD6Q53TS8 623 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 HELQQ8TDG4 1101 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 POMGNT1Q8WZA1 660 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 TATDN2Q93075 761 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 PDCD2LQ9BRP1 358 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 KMT5AQ9NQR1 393 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 USP20Q9Y2K6 914 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 CTDP1Q9Y5B0 961 aaPredicted RBP15.64■□□□□ 0.09
ACTN1-211ENST00000553882 H0YHG0 523 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 LYPLA2O95372 231 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 EGFRP00533 1210 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 CTNNA2P26232 953 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 MTMR2Q13614 643 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 ARHGEF16Q5VV41 709 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 MICALCLQ6ZW33 695 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 CCDC25Q86WR0 208 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 CD101Q93033 1021 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 RPS6KC1Q96S38 1066 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 DDX20Q9UHI6 824 aaKnown RBP15.64■□□□□ 0.09
ACTN1-211ENST00000553882 PGAP2Q9UHJ9 254 aa15.64■□□□□ 0.09
ACTN1-211ENST00000553882 CLDN3O15551 220 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 RARAP10276 462 aa15.63■□□□□ 0.09
ACTN1-211ENST00000553882 LMBRD2Q68DH5 695 aaPredicted RBP15.63■□□□□ 0.09
ACTN1-211ENST00000553882 SLC39A4Q6P5W5 647 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms