RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 ABHD15Q6UXT9 468 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 SYDE1Q6ZW31 735 aaPredicted RBP4.76□□□□□ -1.65
TDP1-207ENST00000553617 FAM129CQ86XR2 697 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 RHOT1Q8IXI2 618 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 UNC5BQ8IZJ1 945 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 STPG3Q8N7X2 389 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 PIK3C3Q8NEB9 887 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 SNX33Q8WV41 574 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 SLC35A4Q96G79 324 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 PKNOX2Q96KN3 472 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 SYT3Q9BQG1 590 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 CRB3Q9BUF7 120 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 EPB41L4AQ9HCS5 686 aaPredicted RBP4.76□□□□□ -1.65
TDP1-207ENST00000553617 CASS4Q9NQ75 786 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 STARD7Q9NQZ5 370 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 GPRC5BQ9NZH0 403 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 CALCOCO1Q9P1Z2 691 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 DNAI1Q9UI46 699 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 MAGEL2Q9UJ55 1249 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 TPCN1Q9ULQ1 816 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 PADI4Q9UM07 663 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 A0A0G2JNJ9 132 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 FOXN3O00409 490 aaPredicted RBP4.75□□□□□ -1.65
TDP1-207ENST00000553617 KPNA5O15131 536 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 NCK2O43639 380 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 AKR1B10O60218 316 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 FSBPO95073 299 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 ARIH2O95376 493 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 KNG1P01042 644 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 CHGBP05060 677 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 GAAP10253 952 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 CYP2C8P10632 490 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 COL6A1P12109 1028 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 ATF2P15336 505 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 TSHRP16473 764 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 TLE1Q04724 770 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 ZNF543Q08ER8 600 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 MAN2A1Q16706 1144 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 OLFML2BQ68BL8 750 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 HEATR3Q7Z4Q2 680 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 MYLK4Q86YV6 388 aaPredicted RBP4.75□□□□□ -1.65
TDP1-207ENST00000553617 OR10H5Q8NGA6 315 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 WDR48Q8TAF3 677 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 IFI44Q8TCB0 444 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 RAB24Q969Q5 203 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 KIAA1191Q96A73 305 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 CLPTM1LQ96KA5 538 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 GORASP1Q9BQQ3 440 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 ZNF552Q9H707 407 aaPredicted RBP4.75□□□□□ -1.65
TDP1-207ENST00000553617 MANSC1Q9H8J5 431 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 ARMT1Q9H993 441 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 PCDH18Q9HCL0 1135 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 LMBRD1Q9NUN5 540 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 TDP1Q9NUW8 608 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 SAE1Q9UBE0 346 aaPredicted RBP4.75□□□□□ -1.65
TDP1-207ENST00000553617 Q9UFV3 132 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 STAP2Q9UGK3 403 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 FBXO10Q9UK96 956 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 CORO2BQ9UQ03 480 aa4.75□□□□□ -1.65
TDP1-207ENST00000553617 MORC2Q9Y6X9 1032 aaPredicted RBP4.75□□□□□ -1.65
TDP1-207ENST00000553617 USP19O94966 1318 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 ISM1B1AKI9 464 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 AMY1AP04745 511 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 HNRNPLP14866 589 aaKnown RBP eCLIP4.74□□□□□ -1.65
TDP1-207ENST00000553617 NPR1P16066 1061 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 IGFBP6P24592 240 aaPredicted RBP4.74□□□□□ -1.65
TDP1-207ENST00000553617 ECHS1P30084 290 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 ADSLP30566 484 aaPredicted RBP4.74□□□□□ -1.65
TDP1-207ENST00000553617 PPM1AP35813 382 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 ATP8B2P98198 1209 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 RAB39AQ14964 217 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 EIF4HQ15056 248 aaKnown RBP4.74□□□□□ -1.65
TDP1-207ENST00000553617 UBE3CQ15386 1083 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 WDR72Q3MJ13 1102 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 KHDC1Q4VXA5 237 aaKnown RBP4.74□□□□□ -1.65
TDP1-207ENST00000553617 CCDC157Q569K6 752 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 IZUMO3Q5VZ72 239 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 TAS1R1Q7RTX1 841 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 B3GNT8Q7Z7M8 397 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 MSL3Q8N5Y2 521 aaKnown RBP4.74□□□□□ -1.65
TDP1-207ENST00000553617 LILRA3Q8N6C8 439 aaPredicted RBP4.74□□□□□ -1.65
TDP1-207ENST00000553617 RNF152Q8N8N0 203 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 SMARCC2Q8TAQ2 1214 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 ZSCAN18Q8TBC5 510 aaPredicted RBP4.74□□□□□ -1.65
TDP1-207ENST00000553617 MTFMTQ96DP5 389 aaKnown RBP4.74□□□□□ -1.65
TDP1-207ENST00000553617 WDR92Q96MX6 357 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 WRNIP1Q96S55 665 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 COLEC11Q9BWP8 271 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 UNKQ9C0B0 810 aaKnown RBP4.74□□□□□ -1.65
TDP1-207ENST00000553617 C14orf93Q9H972 538 aaKnown RBP4.74□□□□□ -1.65
TDP1-207ENST00000553617 BCO1Q9HAY6 547 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 ARFGAP3Q9NP61 516 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 PNPOQ9NVS9 261 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 ABCF2Q9UG63 623 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 TRPS1Q9UHF7 1281 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 PCDHA5Q9Y5H7 936 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 PCDHA3Q9Y5H8 950 aa4.74□□□□□ -1.65
TDP1-207ENST00000553617 NT5C1B-RDH14C9J2C7 533 aa4.73□□□□□ -1.65
TDP1-207ENST00000553617 H3BUI4 141 aa4.73□□□□□ -1.65
TDP1-207ENST00000553617 MALP21145 153 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms