RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 FAM129AQ9BZQ8 928 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 DDX47Q9H0S4 455 aaKnown RBP13.92□□□□□ -0.18
SHMT2-205ENST00000553474 WNT8AQ9H1J5 351 aa13.92□□□□□ -0.18
SHMT2-205ENST00000553474 BACH1O14867 736 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 TOMM70O94826 608 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 CELF2O95319 508 aaKnown RBP13.91□□□□□ -0.18
SHMT2-205ENST00000553474 KRT14P02533 472 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 GARTP22102 1010 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 CNGA1P29973 690 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 GCLMP48507 274 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 BRDTQ58F21 947 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-205ENST00000553474 SPATS2Q86XZ4 545 aaKnown RBP13.91□□□□□ -0.18
SHMT2-205ENST00000553474 EPS8L1Q8TE68 723 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 PARD3BQ8TEW8 1205 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 ARL8AQ96BM9 186 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 C12orf42Q96LP6 360 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 PCIF1Q9H4Z3 704 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 RPAP3Q9H6T3 665 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-205ENST00000553474 KIAA1586Q9HCI6 787 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 SEPT11Q9NVA2 429 aaKnown RBP13.91□□□□□ -0.18
SHMT2-205ENST00000553474 PKD2L1Q9P0L9 805 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 UVRAGQ9P2Y5 699 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 RASAL2Q9UJF2 1139 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 PHIPQ8WWQ0 1821 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 IGSF9BQ9UPX0 1349 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 ATP2A1O14983 1001 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 SLC16A4O15374 487 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 LRRN2O75325 713 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 DGAT1O75907 488 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 FTLP02792 175 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-205ENST00000553474 MYZAPP0CAP1 466 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 NPTX2P47972 431 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 GUCY2FP51841 1108 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 EIF3BP55884 814 aaKnown RBP13.91□□□□□ -0.18
SHMT2-205ENST00000553474 BACE1P56817 501 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 SPP2Q13103 211 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 FAM102BQ5T8I3 360 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 MOB2Q70IA6 237 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 ARHGEF19Q8IW93 802 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 FBXL13Q8NEE6 735 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 NSUN6Q8TEA1 469 aaKnown RBP13.91□□□□□ -0.18
SHMT2-205ENST00000553474 MFSD14AQ96MC6 490 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 WRNIP1Q96S55 665 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 PLVAPQ9BX97 442 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 KMT5AQ9NQR1 393 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 CTTNBP2NLQ9P2B4 639 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 AMACRQ9UHK6 382 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 NOCTQ9UK39 431 aaKnown RBP13.91□□□□□ -0.18
SHMT2-205ENST00000553474 GTF3C4Q9UKN8 822 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 PLAAQ9Y263 795 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 RRP15Q9Y3B9 282 aaKnown RBP13.91□□□□□ -0.18
SHMT2-205ENST00000553474 ALG6Q9Y672 507 aa13.91□□□□□ -0.18
SHMT2-205ENST00000553474 RLFQ13129 1914 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-205ENST00000553474 C19orf81C9J6K1 198 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 PODXLO00592 558 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 ITGBL1O95965 494 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-205ENST00000553474 CCNE2O96020 404 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 PSAPP07602 524 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 MYCLP12524 364 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-205ENST00000553474 CHRNA3P32297 505 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 HSD17B3P37058 310 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 GCNT1Q02742 428 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 MTMR2Q13614 643 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 UGCGQ16739 394 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 SMYD5Q6GMV2 418 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 MAEAQ7L5Y9 396 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 RPUSD2Q8IZ73 545 aaKnown RBP13.9□□□□□ -0.18
SHMT2-205ENST00000553474 ARHGEF26Q96DR7 871 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 NT5C1BQ96P26 610 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 TMBIM4Q9HC24 238 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 HOMER2Q9NSB8 354 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 RNF146Q9NTX7 359 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 PARP2Q9UGN5 583 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 ADAMTS5Q9UNA0 930 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 COG5Q9UP83 839 aa13.9□□□□□ -0.18
SHMT2-205ENST00000553474 MYH9P35579 1960 aaKnown RBP13.9□□□□□ -0.18
SHMT2-205ENST00000553474 COL11A1P12107 1806 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-205ENST00000553474 GRIN2DO15399 1336 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 ATXN2Q99700 1313 aaKnown RBP13.89□□□□□ -0.19
SHMT2-205ENST00000553474 MYO1CO00159 1063 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 EBAG9O00559 213 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 NR3C2P08235 984 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 NR1D1P20393 614 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 ADSSP30520 456 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 PDE6CP51160 858 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 GNGT1P63211 74 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 DR1Q01658 176 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 DCAF12L1Q5VU92 463 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 ANO5Q75V66 913 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 CROCCP2Q86T23 111 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 ZNF677Q86XU0 584 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 SCYL3Q8IZE3 742 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 DHX38Q92620 1227 aaKnown RBP13.89□□□□□ -0.19
SHMT2-205ENST00000553474 ZSWIM1Q9BR11 485 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 ERP44Q9BS26 406 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 TAS2R14Q9NYV8 317 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 PCYOX1Q9UHG3 505 aa13.89□□□□□ -0.19
SHMT2-205ENST00000553474 ZNF112Q9UJU3 913 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms