RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 KCND1Q9NSA2 647 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 RTEL1Q9NZ71 1219 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 ZFP69BQ9UJL9 534 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 NR2E3Q9Y5X4 410 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 ABHD14A-ACY1A0A1B0GW23 586 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 KLRG2A4D1S0 409 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-209ENST00000553280 MGEA5O60502 916 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 TCEA3O75764 348 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 FTLP02792 175 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-209ENST00000553280 CYP2C8P10632 490 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 PFKLP17858 780 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 CTSSP25774 331 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 HK3P52790 923 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 CD69Q07108 199 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 TARBP2Q15633 366 aaKnown RBP6.26□□□□□ -1.41
SCFD1-209ENST00000553280 INO80DQ53TQ3 878 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-209ENST00000553280 XRRA1Q6P2D8 792 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 C1orf228Q6PIY5 440 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 B3GNT8Q7Z7M8 397 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 BCL6BQ8N143 479 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-209ENST00000553280 STPG3Q8N7X2 389 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 PLBD2Q8NHP8 589 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 HOXB13Q92826 284 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-209ENST00000553280 EVI5LQ96CN4 794 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 SGCZQ96LD1 299 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 RSAD1Q9HA92 442 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 PPCSQ9HAB8 311 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 POLR3BQ9NW08 1133 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-209ENST00000553280 FNIP2Q9P278 1114 aa6.26□□□□□ -1.41
SCFD1-209ENST00000553280 SAE1Q9UBE0 346 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-209ENST00000553280 CFAP69A5D8W1 941 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 FRS3O43559 492 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 AKR1B10O60218 316 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 PHF2O75151 1096 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 TMEM127O75204 238 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 LY86O95711 162 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 CHGBP05060 677 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 MC3RP41968 323 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 ITGA1P56199 1179 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 CHAF1AQ13111 956 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-209ENST00000553280 POLD3Q15054 466 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-209ENST00000553280 WDR72Q3MJ13 1102 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 HSP90AB4PQ58FF6 505 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 C19orf54Q5BKX5 351 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 DPP9Q86TI2 863 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 C3orf20Q8ND61 904 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 PHKBQ93100 1093 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 CLIC6Q96NY7 704 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 DMRTA2Q96SC8 542 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 SYT3Q9BQG1 590 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 APOL5Q9BWW9 433 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 RAPGEFL1Q9UHV5 662 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 MAGEL2Q9UJ55 1249 aa6.25□□□□□ -1.41
SCFD1-209ENST00000553280 A0A0G2JLL6 359 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-209ENST00000553280 A0A0G2JNJ9 132 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 ENDOD1O94919 500 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 FSBPO95073 299 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 LTA4HP09960 611 aaKnown RBP6.24□□□□□ -1.41
SCFD1-209ENST00000553280 MYF5P13349 255 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 ATF2P15336 505 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 RPL17P18621 184 aaKnown RBP6.24□□□□□ -1.41
SCFD1-209ENST00000553280 IGFBP6P24592 240 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-209ENST00000553280 PIK3CBP42338 1070 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 RAB1AP62820 205 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 NKX6-1P78426 367 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-209ENST00000553280 CDC42EP1Q00587 391 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 NOGQ13253 232 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 ADAM9Q13443 819 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 FGL2Q14314 439 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 RTP5Q14D33 572 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 CCDC157Q569K6 752 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 PHF19Q5T6S3 580 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 TMEM200BQ69YZ2 307 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 APOA5Q6Q788 366 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 SKAP1Q86WV1 359 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 RHOT1Q8IXI2 618 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 SYT8Q8NBV8 401 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 VPS37AQ8NEZ2 397 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 SMARCC2Q8TAQ2 1214 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 DEPTORQ8TB45 409 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 FEZF2Q8TBJ5 459 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 NKD2Q969F2 451 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-209ENST00000553280 APIPQ96GX9 242 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 WDR92Q96MX6 357 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 WRNIP1Q96S55 665 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 SELENOOQ9BVL4 669 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 Q9UFV3 132 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 FBXO10Q9UK96 956 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 TPCN1Q9ULQ1 816 aa6.24□□□□□ -1.41
SCFD1-209ENST00000553280 CCDC189A1A4V9 331 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 OTOL1A6NHN0 477 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-209ENST00000553280 B8ZZF3 427 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 RASA4BC9J798 803 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 RASA4O43374 803 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 SASH1O94885 1247 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 ARIH2O95376 493 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 GAAP10253 952 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 TRAPPC10P48553 1259 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 PRIM2P49643 509 aa6.23□□□□□ -1.41
SCFD1-209ENST00000553280 FOXO4P98177 505 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms