RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 PTGESO14684 152 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 MEFVO15553 781 aaPredicted RBP21.23■□□□□ 0.99
PTCH1-227ENST00000553256 CSPG5O95196 566 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 BRD1O95696 1058 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 MAPTP10636 758 aaKnown RBP21.23■□□□□ 0.99
PTCH1-227ENST00000553256 PDIA4P13667 645 aaKnown RBP21.23■□□□□ 0.99
PTCH1-227ENST00000553256 DDIT3P35638 169 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 ALDH7A1P49419 539 aaKnown RBP21.23■□□□□ 0.99
PTCH1-227ENST00000553256 NCKAP1LP55160 1127 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 CACNB1Q02641 598 aaPredicted RBP21.23■□□□□ 0.99
PTCH1-227ENST00000553256 RAD51AP2Q09MP3 1159 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 DMP1Q13316 513 aaPredicted RBP21.23■□□□□ 0.99
PTCH1-227ENST00000553256 DUSP6Q16828 381 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 DDX53Q86TM3 631 aaKnown RBP21.23■□□□□ 0.99
PTCH1-227ENST00000553256 URGCPQ8TCY9 931 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 ADAMTS19Q8TE59 1207 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 CDK5RAP3Q96JB5 506 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 ZBP1Q9H171 429 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 KMT5AQ9NQR1 393 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 ODF2LQ9ULJ1 636 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 ZDHHC9Q9Y397 364 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 RBM19Q9Y4C8 960 aaKnown RBP21.23■□□□□ 0.99
PTCH1-227ENST00000553256 IRAK3Q9Y616 596 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 C5orf42Q9H799 3197 aa21.23■□□□□ 0.99
PTCH1-227ENST00000553256 CARNS1A5YM72 827 aa21.22■□□□□ 0.99
PTCH1-227ENST00000553256 H3BQ06 376 aaPredicted RBP21.22■□□□□ 0.99
PTCH1-227ENST00000553256 NRP1O14786 923 aa21.22■□□□□ 0.99
PTCH1-227ENST00000553256 SLC16A4O15374 487 aa21.22■□□□□ 0.99
PTCH1-227ENST00000553256 LILRB3O75022 631 aa21.22■□□□□ 0.99
PTCH1-227ENST00000553256 F13A1P00488 732 aa21.22■□□□□ 0.99
PTCH1-227ENST00000553256 ATF7IP2Q5U623 682 aa21.22■□□□□ 0.99
PTCH1-227ENST00000553256 TMEM184AQ6ZMB5 413 aa21.22■□□□□ 0.99
PTCH1-227ENST00000553256 GPBP1Q86WP2 473 aa21.22■□□□□ 0.99
PTCH1-227ENST00000553256 MRPL43Q8N983 215 aaKnown RBP21.22■□□□□ 0.99
PTCH1-227ENST00000553256 KRI1Q8N9T8 703 aaKnown RBP21.22■□□□□ 0.99
PTCH1-227ENST00000553256 LARP4BQ92615 738 aaKnown RBP21.22■□□□□ 0.99
PTCH1-227ENST00000553256 TCF25Q9BQ70 676 aa21.22■□□□□ 0.99
PTCH1-227ENST00000553256 NGRNQ9NPE2 291 aaKnown RBP21.22■□□□□ 0.99
PTCH1-227ENST00000553256 SNTG2Q9NY99 539 aa21.22■□□□□ 0.99
PTCH1-227ENST00000553256 GRXCR2A6NFK2 248 aa21.21■□□□□ 0.99
PTCH1-227ENST00000553256 C2orf71A6NGG8 1288 aa21.21■□□□□ 0.99
PTCH1-227ENST00000553256 CCDC169A6NNP5 214 aa21.21■□□□□ 0.99
PTCH1-227ENST00000553256 F8W810 466 aa21.21■□□□□ 0.99
PTCH1-227ENST00000553256 PPP6R2O75170 966 aa21.21■□□□□ 0.99
PTCH1-227ENST00000553256 SSBP05455 408 aaKnown RBP eCLIP21.21■□□□□ 0.99
PTCH1-227ENST00000553256 NRIP1P48552 1158 aa21.21■□□□□ 0.99
PTCH1-227ENST00000553256 RBM10P98175 930 aaKnown RBP21.21■□□□□ 0.99
PTCH1-227ENST00000553256 KRT17Q04695 432 aa21.21■□□□□ 0.99
PTCH1-227ENST00000553256 XKR4Q5GH76 650 aa21.21■□□□□ 0.99
PTCH1-227ENST00000553256 AXDND1Q5T1B0 1012 aaPredicted RBP21.21■□□□□ 0.99
PTCH1-227ENST00000553256 NECAB3Q96P71 396 aaPredicted RBP21.21■□□□□ 0.99
PTCH1-227ENST00000553256 TARS2Q9BW92 718 aaKnown RBP21.21■□□□□ 0.99
PTCH1-227ENST00000553256 APOL6Q9BWW8 343 aa21.21■□□□□ 0.99
PTCH1-227ENST00000553256 TRIM6Q9C030 488 aaPredicted RBP21.21■□□□□ 0.99
PTCH1-227ENST00000553256 CDT1Q9H211 546 aa21.21■□□□□ 0.99
PTCH1-227ENST00000553256 CLDND1Q9NY35 253 aa21.21■□□□□ 0.99
PTCH1-227ENST00000553256 TFIP11Q9UBB9 837 aaKnown RBP21.21■□□□□ 0.99
PTCH1-227ENST00000553256 PUF60Q9UHX1 559 aaKnown RBP21.21■□□□□ 0.99
PTCH1-227ENST00000553256 PER2O15055 1255 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 RECQL4O94761 1208 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 YEATS4O95619 227 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 CTSAP10619 480 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 RNASELQ05823 741 aaKnown RBP21.2■□□□□ 0.98
PTCH1-227ENST00000553256 DCAF4L1Q3SXM0 396 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 PLPP4Q5VZY2 271 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 ALKAL1Q6UXT8 129 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 CEP120Q8N960 986 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 TMEM169Q96HH4 297 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 CDCA3Q99618 268 aaPredicted RBP21.2■□□□□ 0.98
PTCH1-227ENST00000553256 HAPLN2Q9GZV7 340 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 GBP3Q9H0R5 595 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 KLK14Q9P0G3 267 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 STK17AQ9UEE5 414 aa21.2■□□□□ 0.98
PTCH1-227ENST00000553256 TCF20Q9UGU0 1960 aaKnown RBP21.19■□□□□ 0.98
PTCH1-227ENST00000553256 ALDH2P05091 517 aa21.19■□□□□ 0.98
PTCH1-227ENST00000553256 LIG1P18858 919 aa21.19■□□□□ 0.98
PTCH1-227ENST00000553256 GRIK3Q13003 919 aa21.19■□□□□ 0.98
PTCH1-227ENST00000553256 E2F4Q16254 413 aa21.19■□□□□ 0.98
PTCH1-227ENST00000553256 RBM23Q86U06 439 aaKnown RBP21.19■□□□□ 0.98
PTCH1-227ENST00000553256 HACE1Q8IYU2 909 aa21.19■□□□□ 0.98
PTCH1-227ENST00000553256 VPS52Q8N1B4 723 aa21.19■□□□□ 0.98
PTCH1-227ENST00000553256 DNAJC19Q96DA6 116 aa21.19■□□□□ 0.98
PTCH1-227ENST00000553256 MRPL4Q9BYD3 311 aaKnown RBP21.19■□□□□ 0.98
PTCH1-227ENST00000553256 IGFLR1Q9H665 355 aa21.19■□□□□ 0.98
PTCH1-227ENST00000553256 TLE6Q9H808 572 aa21.19■□□□□ 0.98
PTCH1-227ENST00000553256 KCNG1Q9UIX4 513 aa21.19■□□□□ 0.98
PTCH1-227ENST00000553256 SPTLC2O15270 562 aa21.18■□□□□ 0.98
PTCH1-227ENST00000553256 IL9P15248 144 aa21.18■□□□□ 0.98
PTCH1-227ENST00000553256 GRM5P41594 1212 aa21.18■□□□□ 0.98
PTCH1-227ENST00000553256 COASYQ13057 564 aa21.18■□□□□ 0.98
PTCH1-227ENST00000553256 ZBTB45Q96K62 511 aaPredicted RBP21.18■□□□□ 0.98
PTCH1-227ENST00000553256 PAAF1Q9BRP4 392 aa21.18■□□□□ 0.98
PTCH1-227ENST00000553256 STRA6Q9BX79 667 aa21.18■□□□□ 0.98
PTCH1-227ENST00000553256 LARSQ9P2J5 1176 aaKnown RBP21.18■□□□□ 0.98
PTCH1-227ENST00000553256 PARP2Q9UGN5 583 aa21.18■□□□□ 0.98
PTCH1-227ENST00000553256 FAN1Q9Y2M0 1017 aa21.18■□□□□ 0.98
PTCH1-227ENST00000553256 MYMKA6NI61 221 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 PIGRP01833 764 aa21.17■□□□□ 0.98
PTCH1-227ENST00000553256 SMC1AQ14683 1233 aaKnown RBP21.17■□□□□ 0.98
PTCH1-227ENST00000553256 PTPN14Q15678 1187 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms