RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 SIX2Q9NPC8 291 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 GRHL1Q9NZI5 618 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 CNOT7Q9UIV1 285 aaKnown RBP12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 PCDHA2Q9Y5H9 948 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 USP54Q70EL1 1684 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 GPSM2P81274 684 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 FYB2Q5VWT5 728 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 BTNL9Q6UXG8 535 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 MIGA2Q7L4E1 593 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 PPFIBP2Q8ND30 876 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 HAUS1Q96CS2 278 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 GPR75-ASB3A0A0A6YYF3 556 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 A0A0G2JND7 137 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 TISP43B9A030 160 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 GOLGA8SH3BPF8 625 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 GOLGA8MH3BSY2 632 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 EYA4O95677 639 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 BFSP1Q12934 665 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 CERKLQ49MI3 558 aaPredicted RBP12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 PHLDB3Q6NSJ2 640 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 APBB1IPQ7Z5R6 666 aaPredicted RBP12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 ZNF570Q96NI8 536 aa12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 ROPN1BQ9BZX4 212 aaPredicted RBP12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 ROPN1Q9HAT0 212 aaPredicted RBP12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 PHRF1Q9P1Y6 1649 aaKnown RBP12.38□□□□□ -0.43
PPFIA2-227ENST00000552948 VCAM1P19320 739 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 NT5C2P49902 561 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 ICA1Q05084 483 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 GRAPQ13588 217 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 ZNF268Q14587 947 aaPredicted RBP12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 PPP1R18Q6NYC8 613 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 PRUNE1Q86TP1 453 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 GRAPLQ8TC17 118 aaPredicted RBP12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 SNF8Q96H20 258 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 ADAM7Q9H2U9 754 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 AGPAT3Q9NRZ7 376 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 KLHL11Q9NVR0 708 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 DAGLAQ9Y4D2 1042 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 MYO3BQ8WXR4 1341 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 EML1O00423 815 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 TGFB1I1O43294 461 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 CBX6O95503 412 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 CALCAP01258 141 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 FAM98CQ17RN3 349 aaKnown RBP12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 KIFAP3Q92845 792 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 BICD1Q96G01 975 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 SERPINB12Q96P63 405 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 ARHGEF10LQ9HCE6 1279 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 CHST7Q9NS84 486 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 NAALADL1Q9UQQ1 740 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 FAM86B1E9PN63 330 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 MSH4O15457 936 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 FAM86B2P0C5J1 330 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 VAMP7P51809 220 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 RRP1BQ14684 758 aaKnown RBP12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 IZUMO3Q5VZ72 239 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 ZC3H18Q86VM9 953 aaKnown RBP12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 PARD3BQ8TEW8 1205 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 GRK7Q8WTQ7 553 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 VCXQ9H320 206 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 DNAJC18Q9H819 358 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 SLCO1B3Q9NPD5 702 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 ADAM22Q9P0K1 906 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 DLGAP2Q9P1A6 1054 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 ZFATQ9P243 1243 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 LARSQ9P2J5 1176 aaKnown RBP12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 MYH7BA7E2Y1 1941 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 ADAMTS7Q9UKP4 1686 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 GOLGA8RI6L899 631 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 ATP2A1O14983 1001 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 RTN2O75298 545 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 CDH16O75309 829 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 PPATQ06203 517 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 TMEM154Q6P9G4 183 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 ARHGEF19Q8IW93 802 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 SPOCK2Q92563 424 aa12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
PPFIA2-227ENST00000552948 CFAP69A5D8W1 941 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 TTC4O95801 387 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 EPHB2P29323 1055 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 DLG4P78352 724 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 RIPK1Q13546 671 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 SPARCL1Q14515 664 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 DAB2IPQ5VWQ8 1189 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 SUPT20HQ8NEM7 779 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 TBC1D22AQ8WUA7 517 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 SLC5A5Q92911 643 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 MYLK2Q9H1R3 596 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 EBF2Q9HAK2 575 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 NPHS2Q9NP85 383 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 METTL5Q9NRN9 209 aaKnown RBP12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 HOXD13P35453 343 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 POU5F1Q01860 360 aaKnown RBP12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 OVGP1Q12889 678 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 BNIP1Q12981 228 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 TLDC1Q6P9B6 456 aa12.36□□□□□ -0.43
PPFIA2-227ENST00000552948 FAM20AQ96MK3 541 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms