RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 EPHA7Q15375 998 aa9.68□□□□□ -0.86
TMEM116-217ENST00000552801 PIK3AP1Q6ZUJ8 805 aa9.68□□□□□ -0.86
TMEM116-217ENST00000552801 TPH2Q8IWU9 490 aa9.68□□□□□ -0.86
TMEM116-217ENST00000552801 TATDN2Q93075 761 aa9.68□□□□□ -0.86
TMEM116-217ENST00000552801 RPS6KC1Q96S38 1066 aa9.68□□□□□ -0.86
TMEM116-217ENST00000552801 COLEC11Q9BWP8 271 aa9.68□□□□□ -0.86
TMEM116-217ENST00000552801 APOL6Q9BWW8 343 aa9.68□□□□□ -0.86
TMEM116-217ENST00000552801 DNAJB4Q9UDY4 337 aa9.68□□□□□ -0.86
TMEM116-217ENST00000552801 CDH22Q9UJ99 828 aa9.68□□□□□ -0.86
TMEM116-217ENST00000552801 PRG3Q9Y2Y8 225 aaPredicted RBP9.68□□□□□ -0.86
TMEM116-217ENST00000552801 IRAK3Q9Y616 596 aa9.68□□□□□ -0.86
TMEM116-217ENST00000552801 PIEZO1Q92508 2521 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 TBX3O15119 743 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 SLC37A4O43826 429 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 GLUD1P00367 558 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 KRT2P35908 639 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 CYP4A11Q02928 519 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 TDGQ13569 410 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 TOB2Q14106 344 aaPredicted RBP9.67□□□□□ -0.86
TMEM116-217ENST00000552801 ANKRD1Q15327 319 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 PTPN14Q15678 1187 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 GPR149Q86SP6 731 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 TMEM173Q86WV6 379 aaPredicted RBP9.67□□□□□ -0.86
TMEM116-217ENST00000552801 ZNF280BQ86YH2 543 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 C4orf19Q8IY42 314 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 TTC13Q8NBP0 860 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 CCDC51Q96ER9 411 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 KLHL5Q96PQ7 755 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 PHOX2BQ99453 314 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 TM6SF1Q9BZW5 370 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 MAN1C1Q9NR34 630 aa9.67□□□□□ -0.86
TMEM116-217ENST00000552801 TDRD15B5MCY1 1934 aaKnown RBP9.67□□□□□ -0.86
TMEM116-217ENST00000552801 STK36Q9NRP7 1315 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 MEIS3P2A8K0S8 358 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 SMAPO00193 183 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 EML1O00423 815 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 NRP1O14786 923 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 PDGFBP01127 241 aaPredicted RBP9.66□□□□□ -0.86
TMEM116-217ENST00000552801 SOD2P04179 222 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 CNPP09543 421 aaKnown RBP9.66□□□□□ -0.86
TMEM116-217ENST00000552801 NCLP19338 710 aaKnown RBP9.66□□□□□ -0.86
TMEM116-217ENST00000552801 GLUD2P49448 558 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 CLCN5P51795 746 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 CREMQ03060 361 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 CTTNQ14247 550 aaKnown RBP9.66□□□□□ -0.86
TMEM116-217ENST00000552801 CALCRLQ16602 461 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 KANK3Q6NY19 840 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 AGMOQ6ZNB7 445 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 C15orf39Q6ZRI6 1047 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 NUDT18Q6ZVK8 323 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 FERMT3Q86UX7 667 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 SLC22A17Q8WUG5 538 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 KCTD12Q96CX2 325 aaKnown RBP9.66□□□□□ -0.86
TMEM116-217ENST00000552801 DYDC2Q96IM9 177 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 MBOAT7Q96N66 472 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 AIFM3Q96NN9 605 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 DHX33Q9H6R0 707 aaKnown RBP9.66□□□□□ -0.86
TMEM116-217ENST00000552801 IFT122Q9HBG6 1241 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 ORC3Q9UBD5 711 aaPredicted RBP9.66□□□□□ -0.86
TMEM116-217ENST00000552801 PCDHA12Q9UN75 941 aa9.66□□□□□ -0.86
TMEM116-217ENST00000552801 CCDC195A0A1B0GUA6 201 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
TMEM116-217ENST00000552801 TADA2AO75478 443 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 DGAT1O75907 488 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 DDHD2O94830 711 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 STBD1O95210 358 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 MLH1P40692 756 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 CLCN4P51793 760 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 NFKBIBQ15653 356 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 B3GNT9Q6UX72 402 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 CYP26C1Q6V0L0 522 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 MRPL10Q7Z7H8 261 aaKnown RBP9.65□□□□□ -0.86
TMEM116-217ENST00000552801 ZBTB8OSQ8IWT0 167 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 KCNG4Q8TDN1 519 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 SMG7Q92540 1137 aaKnown RBP9.65□□□□□ -0.86
TMEM116-217ENST00000552801 WNT2BQ93097 391 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 NKD2Q969F2 451 aaPredicted RBP9.65□□□□□ -0.86
TMEM116-217ENST00000552801 CPB2Q96IY4 423 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 TBC1D32Q96NH3 1257 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 GAD1Q99259 594 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 RTP3Q9BQQ7 232 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 PHF20Q9BVI0 1012 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 HERC2P3Q9BVR0 1158 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 KCNMB3Q9NPA1 279 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.65□□□□□ -0.86
TMEM116-217ENST00000552801 RGL1Q9NZL6 768 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 IGSF9Q9P2J2 1179 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 PARP2Q9UGN5 583 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 VAV3Q9UKW4 847 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 IPPQ9Y573 584 aa9.65□□□□□ -0.86
TMEM116-217ENST00000552801 ARID2Q68CP9 1835 aa9.65□□□□□ -0.87
TMEM116-217ENST00000552801 ARL5CA6NH57 179 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 LRRIQ4A6NIV6 560 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 M0R2N6 131 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 INPPL1O15357 1258 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 EDIL3O43854 480 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 MYBP10242 640 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 SCRN1Q12765 414 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 SAFBQ15424 915 aaKnown RBP eCLIP9.64□□□□□ -0.87
TMEM116-217ENST00000552801 PALB2Q86YC2 1186 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 338.1 ms