RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 JDP2Q8WYK2 163 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 HOXB13Q92826 284 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-215ENST00000551391 GPHA2Q96T91 129 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 ADI1Q9BV57 179 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 ENKD1Q9H0I2 346 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 ING3Q9NXR8 418 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 TUBD1Q9UJT1 453 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 PNMA8BQ9ULN7 279 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-215ENST00000551391 EID1Q9Y6B2 187 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 ZSCAN20P17040 1043 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-215ENST00000551391 AKAP5P24588 427 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 CRHR1P34998 444 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 RPS19P39019 145 aaKnown RBP4.6□□□□□ -1.67
SCAF11-215ENST00000551391 SLC16A1P53985 500 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 CCT2P78371 535 aaKnown RBP4.6□□□□□ -1.67
SCAF11-215ENST00000551391 KLF10Q13118 480 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 MST1LQ2TV78 715 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 ADGRE4PQ86SQ3 457 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 GPR135Q8IZ08 494 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 SHCBP1Q8NEM2 672 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 Q8TCH9 128 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 COA7Q96BR5 231 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 HSPBAP1Q96EW2 488 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 RTFDC1Q9BY42 306 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-215ENST00000551391 RHOBTB2Q9BYZ6 727 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 CSRNP2Q9H175 543 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 AGO3Q9H9G7 860 aaKnown RBP4.6□□□□□ -1.67
SCAF11-215ENST00000551391 BCO1Q9HAY6 547 aa4.6□□□□□ -1.67
SCAF11-215ENST00000551391 SAP30BPQ9UHR5 308 aaKnown RBP4.6□□□□□ -1.67
SCAF11-215ENST00000551391 FAM171A2A8MVW0 826 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 AKR1B10O60218 316 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 PRAMEF4O60810 478 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 GYPEP15421 78 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 RIN1Q13671 783 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 SAFB2Q14151 953 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCAF11-215ENST00000551391 FHL2Q14192 279 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 R3HDM1Q15032 1099 aaKnown RBP4.59□□□□□ -1.67
SCAF11-215ENST00000551391 PRKD1Q15139 912 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-215ENST00000551391 KRT40Q6A162 431 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 RAVER1Q8IY67 606 aaKnown RBP4.59□□□□□ -1.67
SCAF11-215ENST00000551391 MIER2Q8N344 545 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 PPM1NQ8N819 430 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 OR7D4Q8NG98 312 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCAF11-215ENST00000551391 ZNF480Q8WV37 535 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 NRG4Q8WWG1 115 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 CYFIP2Q96F07 1278 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 RPL10LQ96L21 214 aaKnown RBP4.59□□□□□ -1.67
SCAF11-215ENST00000551391 WWC2-AS2Q96NR7 200 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 DPYSL5Q9BPU6 564 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 C12orf65Q9H3J6 166 aaKnown RBP4.59□□□□□ -1.67
SCAF11-215ENST00000551391 IL23AQ9NPF7 189 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 ZIM2Q9NZV7 527 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 KLHL42Q9P2K6 505 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 TRPS1Q9UHF7 1281 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 IP6K2Q9UHH9 426 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 TCEAL9Q9UHQ7 104 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 ZNF180Q9UJW8 692 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 G3BP2Q9UN86 482 aaKnown RBP4.59□□□□□ -1.67
SCAF11-215ENST00000551391 IPPQ9Y573 584 aa4.59□□□□□ -1.67
SCAF11-215ENST00000551391 HTRA2O43464 458 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-215ENST00000551391 CDC14BO60729 498 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 ENDOD1O94919 500 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 U2AF1L5P0DN76 240 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-215ENST00000551391 ECHS1P30084 290 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 U2AF1Q01081 240 aaKnown RBP eCLIP4.58□□□□□ -1.68
SCAF11-215ENST00000551391 KIF23Q02241 960 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-215ENST00000551391 DUSP2Q05923 314 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 ACAP1Q15027 740 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 PPP2R5AQ15172 486 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 NRN1LQ496H8 165 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 Q6ZVL8 140 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 TAX1BP1Q86VP1 789 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 LILRA3Q8N6C8 439 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-215ENST00000551391 GIMAP8Q8ND71 665 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-215ENST00000551391 JPH3Q8WXH2 748 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-215ENST00000551391 HDAC10Q969S8 669 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 LRRC37BQ96QE4 947 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 PLA2G12BQ9BX93 195 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 DMRT3Q9NQL9 472 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 TLR9Q9NR96 1032 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 GPRC5DQ9NZD1 345 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 ING1Q9UK53 422 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-215ENST00000551391 RCAN3Q9UKA8 241 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 DNM3Q9UQ16 869 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 SLC30A1Q9Y6M5 507 aa4.58□□□□□ -1.68
SCAF11-215ENST00000551391 A0A1W2PRX2 142 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 UBE2QL1A1L167 161 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 NPIPB8E9PQR5 432 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 TSPAN6O43657 245 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 RAD17O75943 681 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 IL33O95760 270 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 POU2F2P09086 479 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 PF4V1P10720 104 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 EDNRBP24530 442 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 ADSLP30566 484 aaPredicted RBP4.57□□□□□ -1.68
SCAF11-215ENST00000551391 CYP2C19P33261 490 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 NPEPPSP55786 919 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 KRTAP1-1Q07627 177 aa4.57□□□□□ -1.68
SCAF11-215ENST00000551391 FOXE3Q13461 319 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms