RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 SMOC2Q9H3U7 446 aa10.06□□□□□ -0.8
LETMD1-228ENST00000550929 POLD4Q9HCU8 107 aa10.06□□□□□ -0.8
LETMD1-228ENST00000550929 GPRC5CQ9NQ84 441 aa10.06□□□□□ -0.8
LETMD1-228ENST00000550929 PPME1Q9Y570 386 aa10.06□□□□□ -0.8
LETMD1-228ENST00000550929 IPPQ9Y573 584 aa10.06□□□□□ -0.8
LETMD1-228ENST00000550929 GAS2O43903 313 aaKnown RBP10.05□□□□□ -0.8
LETMD1-228ENST00000550929 NPTXRO95502 500 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 PDGFBP01127 241 aaPredicted RBP10.05□□□□□ -0.8
LETMD1-228ENST00000550929 ASGR2P07307 311 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 CNPP09543 421 aaKnown RBP10.05□□□□□ -0.8
LETMD1-228ENST00000550929 ARF4P18085 180 aaPredicted RBP10.05□□□□□ -0.8
LETMD1-228ENST00000550929 GLRA2P23416 452 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 AKAP5P24588 427 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 ARL2P36404 184 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 MLH1P40692 756 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 RARRES1P49788 294 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 SCNN1GP51170 649 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 NHLH1Q02575 133 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 MBTD1Q05BQ5 628 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 TFDP1Q14186 410 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 MXD4Q14582 209 aaPredicted RBP10.05□□□□□ -0.8
LETMD1-228ENST00000550929 PTPN14Q15678 1187 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 AMHR2Q16671 573 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 PTPN21Q16825 1174 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 CABP7Q86V35 215 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 KREMEN2Q8NCW0 462 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 ZFP42Q96MM3 310 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 SLC4A5Q9BY07 1137 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 CSRNP2Q9H175 543 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 POLR3FQ9H1D9 316 aaPredicted RBP10.05□□□□□ -0.8
LETMD1-228ENST00000550929 ANKEF1Q9NU02 776 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 KLK14Q9P0G3 267 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 DBR1Q9UK59 544 aaKnown RBP10.05□□□□□ -0.8
LETMD1-228ENST00000550929 USP20Q9Y2K6 914 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 CNTNAP2Q9UHC6 1331 aa10.05□□□□□ -0.8
LETMD1-228ENST00000550929 ARL5CA6NH57 179 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 LRRIQ4A6NIV6 560 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 MED24O75448 989 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 DGAT1O75907 488 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 LYPLA2O95372 231 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 SPATA31C1P0DKV0 1188 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 LIG1P18858 919 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 MTHFRP42898 656 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 VCPP55072 806 aaKnown RBP10.04□□□□□ -0.8
LETMD1-228ENST00000550929 ITIH3Q06033 890 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 SIGLEC14Q08ET2 396 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 NCBP1Q09161 790 aaKnown RBP10.04□□□□□ -0.8
LETMD1-228ENST00000550929 ATAT1Q5SQI0 421 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 NOTUMQ6P988 496 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 BMP8AQ7Z5Y6 402 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 SUGP1Q8IWZ8 645 aaKnown RBP10.04□□□□□ -0.8
LETMD1-228ENST00000550929 COLGALT2Q8IYK4 626 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 PRSS33Q8NF86 280 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 ASIC4Q96FT7 647 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 RIPOR3Q96MK2 946 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 PHOX2BQ99453 314 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 TMEM175Q9BSA9 504 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 EMILIN2Q9BXX0 1053 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 TRIM6Q9C030 488 aaPredicted RBP10.04□□□□□ -0.8
LETMD1-228ENST00000550929 NXF3Q9H4D5 531 aaKnown RBP10.04□□□□□ -0.8
LETMD1-228ENST00000550929 MARCH5Q9NX47 278 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 KANSL3Q9P2N6 904 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 CACNG4Q9UBN1 327 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 PARP2Q9UGN5 583 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 LIMD1Q9UGP4 676 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 LIMCH1Q9UPQ0 1083 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 VPS9D1Q9Y2B5 631 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 NR2E1Q9Y466 385 aa10.04□□□□□ -0.8
LETMD1-228ENST00000550929 LILRB3O75022 631 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 BRD1O95696 1058 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 SPATA31D3P0C874 917 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 AXLP30530 894 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 MRE11P49959 708 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 GIT2Q14161 759 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 NBR1Q14596 966 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 SAFBQ15424 915 aaKnown RBP eCLIP10.03□□□□□ -0.8
LETMD1-228ENST00000550929 KIAA1841Q6NSI8 718 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 SPATA31D4Q6ZUB0 917 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 CATSPER3Q86XQ3 398 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 GLYCTKQ8IVS8 523 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 FBXL6Q8N531 539 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 CNNM3Q8NE01 707 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 RSPH1Q8WYR4 309 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 C8orf76Q96K31 380 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 B3GALT6Q96L58 329 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 NECTIN4Q96NY8 510 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 UBN1Q9NPG3 1134 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 MRPL17Q9NRX2 175 aaKnown RBP10.03□□□□□ -0.8
LETMD1-228ENST00000550929 DZANK1Q9NVP4 752 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 IRAK3Q9Y616 596 aa10.03□□□□□ -0.8
LETMD1-228ENST00000550929 SOD2P04179 222 aa10.02□□□□□ -0.8
LETMD1-228ENST00000550929 URODP06132 367 aa10.02□□□□□ -0.8
LETMD1-228ENST00000550929 CLCN4P51793 760 aa10.02□□□□□ -0.8
LETMD1-228ENST00000550929 TMEM132AQ24JP5 1023 aa10.02□□□□□ -0.8
LETMD1-228ENST00000550929 PPFIBP1Q86W92 1011 aa10.02□□□□□ -0.8
LETMD1-228ENST00000550929 TDRD5Q8NAT2 981 aaKnown RBP10.02□□□□□ -0.8
LETMD1-228ENST00000550929 BSNDQ8WZ55 320 aa10.02□□□□□ -0.8
LETMD1-228ENST00000550929 HERC2P3Q9BVR0 1158 aa10.02□□□□□ -0.8
LETMD1-228ENST00000550929 FAM86C1Q9NVL1 165 aa10.02□□□□□ -0.8
LETMD1-228ENST00000550929 GIT1Q9Y2X7 761 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms