RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 ZNF598Q86UK7 904 aaKnown RBP23.46■■□□□ 1.35
NEK3-202ENST00000550841 CRIPAKQ8N1N5 446 aa23.46■■□□□ 1.35
NEK3-202ENST00000550841 TRIML1Q8N9V2 468 aa23.46■■□□□ 1.35
NEK3-202ENST00000550841 RNF169Q8NCN4 708 aa23.46■■□□□ 1.35
NEK3-202ENST00000550841 KIAA0895Q8NCT3 520 aa23.46■■□□□ 1.35
NEK3-202ENST00000550841 ERCC4Q92889 916 aaPredicted RBP23.46■■□□□ 1.35
NEK3-202ENST00000550841 GBP3Q9H0R5 595 aa23.46■■□□□ 1.35
NEK3-202ENST00000550841 IPPQ9Y573 584 aa23.46■■□□□ 1.35
NEK3-202ENST00000550841 INSL6Q9Y581 213 aa23.46■■□□□ 1.35
NEK3-202ENST00000550841 STYXL1Q9Y6J8 313 aa23.46■■□□□ 1.35
NEK3-202ENST00000550841 PPP1R2P41236 205 aa23.45■■□□□ 1.34
NEK3-202ENST00000550841 KCNA1Q09470 495 aa23.45■■□□□ 1.34
NEK3-202ENST00000550841 NOLC1Q14978 699 aaKnown RBP eCLIP23.45■■□□□ 1.34
NEK3-202ENST00000550841 HS2ST1Q7LGA3 356 aa23.45■■□□□ 1.34
NEK3-202ENST00000550841 ZBTB33Q86T24 672 aa23.45■■□□□ 1.34
NEK3-202ENST00000550841 ABI1Q8IZP0 508 aa23.45■■□□□ 1.34
NEK3-202ENST00000550841 GLIS3Q8NEA6 775 aa23.45■■□□□ 1.34
NEK3-202ENST00000550841 GOLGA5Q8TBA6 731 aa23.45■■□□□ 1.34
NEK3-202ENST00000550841 SYAP1Q96A49 352 aaPredicted RBP23.45■■□□□ 1.34
NEK3-202ENST00000550841 ZBTB45Q96K62 511 aaPredicted RBP23.45■■□□□ 1.34
NEK3-202ENST00000550841 RAD9AQ99638 391 aa23.45■■□□□ 1.34
NEK3-202ENST00000550841 CDT1Q9H211 546 aa23.45■■□□□ 1.34
NEK3-202ENST00000550841 ANKFY1Q9P2R3 1169 aa23.45■■□□□ 1.34
NEK3-202ENST00000550841 MAN1B1Q9UKM7 699 aa23.45■■□□□ 1.34
NEK3-202ENST00000550841 RBAK-RBAKDNI3L0D1 243 aa23.44■■□□□ 1.34
NEK3-202ENST00000550841 TLL1O43897 1013 aa23.44■■□□□ 1.34
NEK3-202ENST00000550841 DGKIO75912 1065 aa23.44■■□□□ 1.34
NEK3-202ENST00000550841 GARTP22102 1010 aa23.44■■□□□ 1.34
NEK3-202ENST00000550841 STIM1Q13586 685 aa23.44■■□□□ 1.34
NEK3-202ENST00000550841 HSP90AA2PQ14568 343 aaPredicted RBP23.44■■□□□ 1.34
NEK3-202ENST00000550841 SKOR2Q2VWA4 1001 aaPredicted RBP23.44■■□□□ 1.34
NEK3-202ENST00000550841 COBLL1Q53SF7 1204 aa23.44■■□□□ 1.34
NEK3-202ENST00000550841 FAM117BQ6P1L5 589 aa23.44■■□□□ 1.34
NEK3-202ENST00000550841 NELFCDQ8IXH7 590 aa23.44■■□□□ 1.34
NEK3-202ENST00000550841 GUF1Q8N442 669 aaKnown RBP23.44■■□□□ 1.34
NEK3-202ENST00000550841 SMG8Q8ND04 991 aaKnown RBP23.44■■□□□ 1.34
NEK3-202ENST00000550841 POMGNT1Q8WZA1 660 aa23.44■■□□□ 1.34
NEK3-202ENST00000550841 YME1L1Q96TA2 773 aa23.44■■□□□ 1.34
NEK3-202ENST00000550841 CCDC94Q9BW85 323 aaPredicted RBP23.44■■□□□ 1.34
NEK3-202ENST00000550841 GIT1Q9Y2X7 761 aa23.44■■□□□ 1.34
NEK3-202ENST00000550841 A0A0B4J269 797 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 ANKRD63C9JTQ0 380 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 ABLIM1O14639 778 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 KIAA0391O15091 583 aaKnown RBP23.43■■□□□ 1.34
NEK3-202ENST00000550841 GRM5P41594 1212 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 SMAD3P84022 425 aaKnown RBP23.43■■□□□ 1.34
NEK3-202ENST00000550841 RAB30Q15771 203 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 CCDC183Q5T5S1 534 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 GLB1LQ6UWU2 654 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 GUCD1Q96NT3 240 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 MSTO1Q9BUK6 570 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 PARP2Q9UGN5 583 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 MSRAQ9UJ68 235 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 GDAQ9Y2T3 454 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 PCDHA11Q9Y5I1 949 aa23.43■■□□□ 1.34
NEK3-202ENST00000550841 OGTO15294 1046 aa23.42■■□□□ 1.34
NEK3-202ENST00000550841 LDHAP00338 332 aaKnown RBP23.42■■□□□ 1.34
NEK3-202ENST00000550841 ATF7P17544 494 aaPredicted RBP23.42■■□□□ 1.34
NEK3-202ENST00000550841 HOXD13P35453 343 aa23.42■■□□□ 1.34
NEK3-202ENST00000550841 YARSP54577 528 aaKnown RBP23.42■■□□□ 1.34
NEK3-202ENST00000550841 HTRA4P83105 476 aaPredicted RBP23.42■■□□□ 1.34
NEK3-202ENST00000550841 MORC3Q14149 939 aa23.42■■□□□ 1.34
NEK3-202ENST00000550841 SLC39A4Q6P5W5 647 aa23.42■■□□□ 1.34
NEK3-202ENST00000550841 ACAP3Q96P50 834 aa23.42■■□□□ 1.34
NEK3-202ENST00000550841 TMEM117Q9H0C3 514 aa23.42■■□□□ 1.34
NEK3-202ENST00000550841 NXF3Q9H4D5 531 aaKnown RBP23.42■■□□□ 1.34
NEK3-202ENST00000550841 RSAD1Q9HA92 442 aa23.42■■□□□ 1.34
NEK3-202ENST00000550841 KANSL3Q9P2N6 904 aa23.42■■□□□ 1.34
NEK3-202ENST00000550841 PDXKO00764 312 aa23.41■■□□□ 1.34
NEK3-202ENST00000550841 HARSP12081 509 aaKnown RBP23.41■■□□□ 1.34
NEK3-202ENST00000550841 KLHL40Q2TBA0 621 aa23.41■■□□□ 1.34
NEK3-202ENST00000550841 ARMCX5Q6P1M9 558 aa23.41■■□□□ 1.34
NEK3-202ENST00000550841 AGMOQ6ZNB7 445 aa23.41■■□□□ 1.34
NEK3-202ENST00000550841 TMCO2Q7Z6W1 182 aaPredicted RBP23.41■■□□□ 1.34
NEK3-202ENST00000550841 THNSL1Q8IYQ7 743 aa23.41■■□□□ 1.34
NEK3-202ENST00000550841 LPPQ93052 612 aa23.41■■□□□ 1.34
NEK3-202ENST00000550841 ZNF689Q96CS4 500 aaPredicted RBP23.41■■□□□ 1.34
NEK3-202ENST00000550841 APOL6Q9BWW8 343 aa23.41■■□□□ 1.34
NEK3-202ENST00000550841 TOPORSQ9NS56 1045 aaPredicted RBP23.41■■□□□ 1.34
NEK3-202ENST00000550841 TYW1Q9NV66 732 aaKnown RBP23.41■■□□□ 1.34
NEK3-202ENST00000550841 SNTG2Q9NY99 539 aa23.41■■□□□ 1.34
NEK3-202ENST00000550841 AGO2Q9UKV8 859 aaKnown RBP23.41■■□□□ 1.34
NEK3-202ENST00000550841 HES2Q9Y543 173 aa23.41■■□□□ 1.34
NEK3-202ENST00000550841 ZMYM2Q9UBW7 1377 aa23.4■■□□□ 1.34
NEK3-202ENST00000550841 GRXCR1A8MXD5 290 aa23.4■■□□□ 1.34
NEK3-202ENST00000550841 BIN1O00499 593 aa23.4■■□□□ 1.34
NEK3-202ENST00000550841 CALUO43852 315 aaPredicted RBP23.4■■□□□ 1.34
NEK3-202ENST00000550841 OFD1O75665 1012 aa23.4■■□□□ 1.34
NEK3-202ENST00000550841 CLTAP09496 248 aa23.4■■□□□ 1.34
NEK3-202ENST00000550841 FGFR1P11362 822 aa23.4■■□□□ 1.34
NEK3-202ENST00000550841 POU5F1Q01860 360 aaKnown RBP23.4■■□□□ 1.34
NEK3-202ENST00000550841 ISM2Q6H9L7 571 aa23.4■■□□□ 1.34
NEK3-202ENST00000550841 CMTR2Q8IYT2 770 aaKnown RBP23.4■■□□□ 1.34
NEK3-202ENST00000550841 URGCPQ8TCY9 931 aa23.4■■□□□ 1.34
NEK3-202ENST00000550841 RNF39Q9H2S5 420 aa23.4■■□□□ 1.34
NEK3-202ENST00000550841 MAPK8IP1Q9UQF2 711 aa23.4■■□□□ 1.34
NEK3-202ENST00000550841 TBKBP1A7MCY6 615 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 TGFB1I1O43294 461 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 AKAP5P24588 427 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 ADSSP30520 456 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms