RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ZKSCAN4Q969J2 545 aaPredicted RBP6.69□□□□□ -1.34
SCAF11-213ENST00000550629 MKL1Q969V6 931 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 JMJD8Q96S16 334 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 IRF2BPLQ9H1B7 796 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 ZNF408Q9H9D4 720 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 AS3MTQ9HBK9 375 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 CAPN10Q9HC96 672 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 INCENPQ9NQS7 918 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 IL17RBQ9NRM6 502 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 MTMR4Q9NYA4 1195 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 NYAP2Q9P242 653 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 DIS3Q9Y2L1 958 aaKnown RBP6.69□□□□□ -1.34
SCAF11-213ENST00000550629 GREB1LQ9C091 1923 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-213ENST00000550629 UBE2Q2LH0YL09 131 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 CXCL11O14625 94 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 IFIT3O14879 490 aaKnown RBP6.68□□□□□ -1.34
SCAF11-213ENST00000550629 FGF10O15520 208 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-213ENST00000550629 PEX10O60683 326 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 CD3EP07766 207 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 ZBTB48P10074 688 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-213ENST00000550629 TOP1P11387 765 aaKnown RBP6.68□□□□□ -1.34
SCAF11-213ENST00000550629 IFNGR1P15260 489 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 PRKCAP17252 672 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 GUCY1A2P33402 732 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 RCAN1P53805 252 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 HUNKP57058 714 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 EVCP57679 992 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 ANTXR2P58335 489 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 POU4F1Q01851 419 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 PPIL2Q13356 520 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 SEPT2Q15019 361 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 RAB3GAP1Q15042 981 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 SEC23AQ15436 765 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 FAM47AQ5JRC9 791 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 RCSD1Q6JBY9 416 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 KIAA1211LQ6NV74 962 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 CYB5R4Q7L1T6 521 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 SGMS1Q86VZ5 419 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 ENAHQ8N8S7 591 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-213ENST00000550629 GMCL1P1Q8NEA9 526 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 IGDCC4Q8TDY8 1250 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 LPAR1Q92633 364 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 CEP95Q96GE4 821 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 AGXT2Q9BYV1 514 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 KIAA1683Q9H0B3 1180 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 GBP3Q9H0R5 595 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 SUSD2Q9UGT4 822 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 TMX2Q9Y320 296 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 MRVI1Q9Y6F6 885 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 TNKSO95271 1327 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 DOCK1Q14185 1865 aa6.68□□□□□ -1.34
SCAF11-213ENST00000550629 TRPM7Q96QT4 1865 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 RASSF10A6NK89 507 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 C19orf81C9J6K1 198 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 SH2B2O14492 632 aaPredicted RBP6.67□□□□□ -1.34
SCAF11-213ENST00000550629 PPM1BO75688 479 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 CALM1P0DP23 149 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 CALM2P0DP24 149 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 CALM3P0DP25 149 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 EEF2P13639 858 aaKnown RBP6.67□□□□□ -1.34
SCAF11-213ENST00000550629 MCM2P49736 904 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 NEK4P51957 841 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 USP14P54578 494 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 BACE1P56817 501 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 PRKG1Q13976 671 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 WTAPQ15007 396 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 PPP2R5BQ15173 497 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 IFIT1BQ5T764 474 aaKnown RBP6.67□□□□□ -1.34
SCAF11-213ENST00000550629 VHLLQ6RSH7 139 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 MOB2Q70IA6 237 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 NUP43Q8NFH3 380 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 CLMNQ96JQ2 1002 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 MAP3K14Q99558 947 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 MCMBPQ9BTE3 642 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 UPF3BQ9BZI7 483 aaKnown RBP6.67□□□□□ -1.34
SCAF11-213ENST00000550629 KAT14Q9H8E8 782 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 LY9Q9HBG7 655 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 PDRG1Q9NUG6 133 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 IMPACTQ9P2X3 320 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 ACSL6Q9UKU0 697 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 STX8Q9UNK0 236 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 AFG3L2Q9Y4W6 797 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 ZHX2Q9Y6X8 837 aa6.67□□□□□ -1.34
SCAF11-213ENST00000550629 POLR2AP24928 1970 aaKnown RBP6.67□□□□□ -1.34
SCAF11-213ENST00000550629 OTOFQ9HC10 1997 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 A0A0G2JLL6 359 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-213ENST00000550629 NMT2O60551 498 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 DDAH1O94760 285 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 CETPP11597 493 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 GTF2A2P52657 109 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 INHBEP58166 350 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 ERVFRD-1P60508 538 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 CYP4F8P98187 520 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 SPP2Q13103 211 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 SNAPC2Q13487 334 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 SHROOM1Q2M3G4 852 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-213ENST00000550629 HLA-DQA1Q5Y7H0 255 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 RGMBQ6NW40 437 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 SYNE3Q6ZMZ3 975 aa6.66□□□□□ -1.34
SCAF11-213ENST00000550629 Q6ZUG5 572 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms