RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 NAMPTP43490 491 aa22.66■■□□□ 1.22
PRDM4-205ENST00000550376 SLC47A2Q86VL8 602 aa22.66■■□□□ 1.22
PRDM4-205ENST00000550376 CDR2LQ86X02 465 aaPredicted RBP22.66■■□□□ 1.22
PRDM4-205ENST00000550376 SYT11Q9BT88 431 aa22.66■■□□□ 1.22
PRDM4-205ENST00000550376 RNPEPQ9H4A4 650 aa22.66■■□□□ 1.22
PRDM4-205ENST00000550376 TRPC6Q9Y210 931 aa22.66■■□□□ 1.22
PRDM4-205ENST00000550376 MAPK13O15264 365 aa22.66■■□□□ 1.22
PRDM4-205ENST00000550376 CSDE1O75534 798 aaKnown RBP22.66■■□□□ 1.22
PRDM4-205ENST00000550376 CELF2O95319 508 aaKnown RBP22.66■■□□□ 1.22
PRDM4-205ENST00000550376 CRELD2Q6UXH1 353 aaPredicted RBP22.66■■□□□ 1.22
PRDM4-205ENST00000550376 AFAP1L1Q8TED9 768 aa22.66■■□□□ 1.22
PRDM4-205ENST00000550376 PKNOX2Q96KN3 472 aa22.66■■□□□ 1.22
PRDM4-205ENST00000550376 RAB20Q9NX57 234 aa22.66■■□□□ 1.22
PRDM4-205ENST00000550376 N4BP1O75113 896 aaKnown RBP22.65■■□□□ 1.22
PRDM4-205ENST00000550376 MAFO75444 373 aaPredicted RBP22.65■■□□□ 1.22
PRDM4-205ENST00000550376 SASH3O75995 380 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 TNNI1P19237 187 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 PRPF4BQ13523 1007 aaKnown RBP22.65■■□□□ 1.22
PRDM4-205ENST00000550376 PLCB4Q15147 1175 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 PTPN18Q99952 460 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 TMEM8AQ9HCN3 771 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 CEP350Q5VT06 3117 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 ZNFX1Q9P2E3 1918 aaKnown RBP22.65■■□□□ 1.22
PRDM4-205ENST00000550376 GARTP22102 1010 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 SPOPLQ6IQ16 392 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 TXLNBQ8N3L3 684 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 METTL13Q8N6R0 699 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 RNF149Q8NC42 400 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 FBXL13Q8NEE6 735 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 PPP1R13LQ8WUF5 828 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 ARHGEF26Q96DR7 871 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 PCDHGC5Q9Y5F6 944 aa22.65■■□□□ 1.22
PRDM4-205ENST00000550376 ZRANB2O95218 330 aaKnown RBP eCLIP22.64■■□□□ 1.22
PRDM4-205ENST00000550376 RHPN2Q8IUC4 686 aa22.64■■□□□ 1.22
PRDM4-205ENST00000550376 RPUSD2Q8IZ73 545 aaKnown RBP22.64■■□□□ 1.22
PRDM4-205ENST00000550376 HELQQ8TDG4 1101 aa22.64■■□□□ 1.22
PRDM4-205ENST00000550376 HDAC7Q8WUI4 952 aa22.64■■□□□ 1.22
PRDM4-205ENST00000550376 MPHOSPH6Q99547 160 aaKnown RBP22.64■■□□□ 1.22
PRDM4-205ENST00000550376 AGPAT1Q99943 283 aa22.64■■□□□ 1.22
PRDM4-205ENST00000550376 MSTO1Q9BUK6 570 aa22.64■■□□□ 1.22
PRDM4-205ENST00000550376 THAP2Q9H0W7 228 aa22.64■■□□□ 1.22
PRDM4-205ENST00000550376 ST7Q9NRC1 585 aa22.64■■□□□ 1.22
PRDM4-205ENST00000550376 P4HA2O15460 535 aa22.64■■□□□ 1.21
PRDM4-205ENST00000550376 EXTL3O43909 919 aa22.64■■□□□ 1.21
PRDM4-205ENST00000550376 NOP9Q86U38 636 aaKnown RBP22.64■■□□□ 1.21
PRDM4-205ENST00000550376 PSPC1Q8WXF1 523 aaKnown RBP22.64■■□□□ 1.21
PRDM4-205ENST00000550376 GBA2Q9HCG7 927 aaPredicted RBP22.64■■□□□ 1.21
PRDM4-205ENST00000550376 PNMA3Q9UL41 463 aa22.64■■□□□ 1.21
PRDM4-205ENST00000550376 BRCA2P51587 3418 aa22.64■■□□□ 1.21
PRDM4-205ENST00000550376 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.63■■□□□ 1.21
PRDM4-205ENST00000550376 CLSTN1O94985 981 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 CETPP11597 493 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 TNFSF9P41273 254 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 ADCYAP1R1P41586 468 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 CLCN3P51790 818 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 LAMTOR4Q0VGL1 99 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 KIF22Q14807 665 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 MEI1Q5TIA1 1274 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 PCDHB18PQ96TA0 734 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 TCHPQ9BT92 498 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 ABCB6Q9NP58 842 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 ADCY3O60266 1144 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 RFC5P40937 340 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 CCDC181Q5TID7 509 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 ILDR2Q71H61 639 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 MSANTD4Q8NCY6 345 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 TMC2Q8TDI7 906 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 NLRP4Q96MN2 994 aa22.63■■□□□ 1.21
PRDM4-205ENST00000550376 TTLL4Q14679 1199 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 C10orf76Q5T2E6 689 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 SPATA4Q8NEY3 305 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 TPCN2Q8NHX9 752 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 SLC35G2Q8TBE7 412 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 ATP8B4Q8TF62 1192 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 BBXQ8WY36 941 aaPredicted RBP22.62■■□□□ 1.21
PRDM4-205ENST00000550376 FAM212AQ96EL1 285 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 GDAP1L1Q96MZ0 367 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 FNBP1Q96RU3 617 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 SLC7A5Q01650 507 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 CKAP4Q07065 602 aaKnown RBP22.62■■□□□ 1.21
PRDM4-205ENST00000550376 BIRC3Q13489 604 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 GSPT2Q8IYD1 628 aaKnown RBP22.62■■□□□ 1.21
PRDM4-205ENST00000550376 ARFGAP3Q9NP61 516 aa22.62■■□□□ 1.21
PRDM4-205ENST00000550376 RBAKQ9NYW8 714 aaPredicted RBP22.62■■□□□ 1.21
PRDM4-205ENST00000550376 GRIN3BO60391 1043 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 TBC1D8O95759 1140 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 MMEP08473 750 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 ZNF286BP0CG31 522 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 CHRNB2P17787 502 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 TCP1P17987 556 aaKnown RBP22.61■■□□□ 1.21
PRDM4-205ENST00000550376 GTF2A2P52657 109 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 TDRD10Q5VZ19 366 aaKnown RBP22.61■■□□□ 1.21
PRDM4-205ENST00000550376 TAPT1Q6NXT6 567 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 LRRC57Q8N9N7 239 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 ATMINO43313 823 aaPredicted RBP22.61■■□□□ 1.21
PRDM4-205ENST00000550376 LGR5O75473 907 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 OSTNP61366 133 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 LONRF2Q1L5Z9 754 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 ZNF792Q3KQV3 632 aa22.61■■□□□ 1.21
PRDM4-205ENST00000550376 DAAM2Q86T65 1068 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms