RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 ZDHHC14Q8IZN3 488 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 ANKRD35Q8N283 1001 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 FAM81AQ8TBF8 368 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 RBM41Q96IZ5 413 aaKnown RBP12.94□□□□□ -0.34
VDR-208ENST00000550325 MXD3Q9BW11 206 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 UBE2OQ9C0C9 1292 aaKnown RBP12.94□□□□□ -0.34
VDR-208ENST00000550325 LRMDAQ9H2I8 198 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 DCLRE1BQ9H816 532 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 DIS3Q9Y2L1 958 aaKnown RBP12.94□□□□□ -0.34
VDR-208ENST00000550325 GYG2O15488 501 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 MAP3K7O43318 606 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 ATP5HO75947 161 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 ATF2P15336 505 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 ACADSP16219 412 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 PSMC6P62333 389 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 SLC5A9Q2M3M2 681 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 MTHFD1LQ6UB35 978 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 FRMD5Q7Z6J6 570 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 TRIM74Q86UV6 250 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 TRIM73Q86UV7 250 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
VDR-208ENST00000550325 RHBDL2Q9NX52 303 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 TIAM2Q8IVF5 1701 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 EXOC1LA0A1B0GW35 172 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 BHMG1C9JSJ3 638 aaPredicted RBP12.94□□□□□ -0.34
VDR-208ENST00000550325 OPHN1O60890 802 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 WFS1O76024 890 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 PRKCIP41743 596 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 MKRN3Q13064 507 aaKnown RBP12.94□□□□□ -0.34
VDR-208ENST00000550325 LRRC36Q1X8D7 754 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.94□□□□□ -0.34
VDR-208ENST00000550325 PRKAG3Q9UGI9 489 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 CASZ1Q86V15 1759 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 CCDC160A6NGH7 325 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 FAM47DPA6NHR8 397 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
VDR-208ENST00000550325 CETPP11597 493 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 HIBADHP31937 336 aaKnown RBP12.94□□□□□ -0.34
VDR-208ENST00000550325 NPEPPSP55786 919 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 PDIA5Q14554 519 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 TMEM119Q4V9L6 283 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 C12orf60Q5U649 245 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 IRGCQ6NXR0 463 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 ZSWIM1Q9BR11 485 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 LZTS2Q9BRK4 669 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 VPS37BQ9H9H4 285 aa12.94□□□□□ -0.34
VDR-208ENST00000550325 PIAS1O75925 651 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 ART4Q93070 314 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 SLC35C1Q96A29 364 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 REEP2Q9BRK0 252 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 LRCH1Q9Y2L9 728 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 ANKRD62A6NC57 917 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 SMAPO00193 183 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 TTC4O95801 387 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 CETN2P41208 172 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 DEUP1Q05D60 604 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 MTM1Q13496 603 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 LBRQ14739 615 aaKnown RBP12.93□□□□□ -0.34
VDR-208ENST00000550325 FYB2Q5VWT5 728 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 ISLR2Q6UXK2 745 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 SLC13A5Q86YT5 568 aaPredicted RBP12.93□□□□□ -0.34
VDR-208ENST00000550325 CCDC125Q86Z20 511 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 TAB3Q8N5C8 712 aaPredicted RBP12.93□□□□□ -0.34
VDR-208ENST00000550325 TTC1Q99614 292 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 UBE2TQ9NPD8 197 aaPredicted RBP12.93□□□□□ -0.34
VDR-208ENST00000550325 ACP6Q9NPH0 428 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 LMCD1Q9NZU5 365 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 USP17L15C9J2P7 530 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 USP17L13C9JLJ4 530 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 USP17L11C9JVI0 530 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 USP17L18D6R9N7 530 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 USP17L22D6RA61 530 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 USP17L17D6RBQ6 530 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 USP17L19D6RCP7 530 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 USP17L20D6RJB6 530 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 FOXN3O00409 490 aaPredicted RBP12.93□□□□□ -0.34
VDR-208ENST00000550325 RASA1P20936 1047 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 CCNG1P51959 295 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 DRG2P55039 364 aaKnown RBP12.93□□□□□ -0.34
VDR-208ENST00000550325 PPATQ06203 517 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 USP17L24Q0WX57 530 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 PARP6Q2NL67 630 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 MDH1BQ5I0G3 518 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 MFSD5Q6N075 450 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 USP17L6PQ6QN14 398 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 ZNF365Q70YC5 407 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 MYCT1Q8N699 235 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 GRAMD1AQ96CP6 724 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 CEP95Q96GE4 821 aa12.93□□□□□ -0.34
VDR-208ENST00000550325 PFDN1O60925 122 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 MED24O75448 989 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 DYNC1I2Q13409 638 aaKnown RBP12.92□□□□□ -0.34
VDR-208ENST00000550325 SPARCL1Q14515 664 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 EDRF1Q3B7T1 1238 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 CERKLQ49MI3 558 aaPredicted RBP12.92□□□□□ -0.34
VDR-208ENST00000550325 NLRP9Q7RTR0 991 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 ZNF333Q96JL9 665 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 ANKRD27Q96NW4 1050 aa12.92□□□□□ -0.34
VDR-208ENST00000550325 DHX36Q9H2U1 1008 aaKnown RBP12.92□□□□□ -0.34
VDR-208ENST00000550325 METTL14Q9HCE5 456 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms