RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ZFP42Q96MM3 310 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 HSD17B14Q9BPX1 270 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 TMEM175Q9BSA9 504 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 CSRNP2Q9H175 543 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 TMEM60Q9H2L4 133 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 NXF3Q9H4D5 531 aaKnown RBP14.85□□□□□ -0.03
NUP188-211ENST00000550219 GPRC5CQ9NQ84 441 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 MARCH5Q9NX47 278 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 CLIC4Q9Y696 253 aa14.85□□□□□ -0.03
NUP188-211ENST00000550219 TECTAO75443 2155 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 B4GALT5O43286 388 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 LYPLA2O95372 231 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 NPTXRO95502 500 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 BMP15O95972 392 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 ALDH2P05091 517 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 MYBP10242 640 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 ARF4P18085 180 aaPredicted RBP14.84□□□□□ -0.03
NUP188-211ENST00000550219 AXLP30530 894 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 ARL2P36404 184 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 PTPAQ15257 358 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 SF3A1Q15459 793 aaKnown RBP14.84□□□□□ -0.03
NUP188-211ENST00000550219 BMP8AQ7Z5Y6 402 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 HACE1Q8IYU2 909 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 FBXL6Q8N531 539 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 PRSS33Q8NF86 280 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 CCDC51Q96ER9 411 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 CHAMP1Q96JM3 812 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 KLHL5Q96PQ7 755 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 MTMR9Q96QG7 549 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 HERC2P3Q9BVR0 1158 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 KCNH6Q9H252 994 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 SMOC2Q9H3U7 446 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 SFXN1Q9H9B4 322 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 UBN1Q9NPG3 1134 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 MRPL17Q9NRX2 175 aaKnown RBP14.84□□□□□ -0.03
NUP188-211ENST00000550219 TFIP11Q9UBB9 837 aaKnown RBP14.84□□□□□ -0.03
NUP188-211ENST00000550219 CFAP45Q9UL16 551 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 IRAK3Q9Y616 596 aa14.84□□□□□ -0.03
NUP188-211ENST00000550219 KMT2EQ8IZD2 1858 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 ARL5CA6NH57 179 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 F8W810 466 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 YEATS4O95619 227 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 PDGFBP01127 241 aaPredicted RBP14.83□□□□□ -0.04
NUP188-211ENST00000550219 ASGR2P07307 311 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 CNPP09543 421 aaKnown RBP14.83□□□□□ -0.04
NUP188-211ENST00000550219 AKAP5P24588 427 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 MRE11P49959 708 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 VCPP55072 806 aaKnown RBP14.83□□□□□ -0.04
NUP188-211ENST00000550219 KRT85P78386 507 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 ATP2C1P98194 919 aaPredicted RBP14.83□□□□□ -0.04
NUP188-211ENST00000550219 MTMR3Q13615 1198 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 SLC39A14Q15043 492 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 PCBP1Q15365 356 aaKnown RBP eCLIP14.83□□□□□ -0.04
NUP188-211ENST00000550219 AMHR2Q16671 573 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 TMEM132AQ24JP5 1023 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 FOXD4L6Q3SYB3 417 aaPredicted RBP14.83□□□□□ -0.04
NUP188-211ENST00000550219 ATAT1Q5SQI0 421 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 IER5LQ5T953 404 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 POTEGQ6S5H5 508 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 FOXD4L3Q6VB84 417 aaPredicted RBP14.83□□□□□ -0.04
NUP188-211ENST00000550219 PPFIBP1Q86W92 1011 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 COLGALT2Q8IYK4 626 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 LINC00301Q8NCQ3 95 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 ASIC4Q96FT7 647 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 KLK14Q9P0G3 267 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 RCOR1Q9UKL0 485 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 SORCS3Q9UPU3 1222 aa14.83□□□□□ -0.04
NUP188-211ENST00000550219 LAD1O00515 517 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 MED24O75448 989 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 SOD2P04179 222 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 LIG1P18858 919 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 CLCN4P51793 760 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 PTGDRQ13258 359 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 IFNLR1Q8IU57 520 aaPredicted RBP14.82□□□□□ -0.04
NUP188-211ENST00000550219 RPS6KC1Q96S38 1066 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 MAN1C1Q9NR34 630 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 MIOSQ9NXC5 875 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 STK39Q9UEW8 545 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 PARP2Q9UGN5 583 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 DENND4AQ7Z401 1863 aa14.82□□□□□ -0.04
NUP188-211ENST00000550219 NR1I2O75469 434 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 OR52Z1P0C646 297 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 SPATA31C1P0DKV0 1188 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 PRPHP41219 470 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 GLUD2P49448 558 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 ARL6IP4Q66PJ3 421 aaKnown RBP14.81□□□□□ -0.04
NUP188-211ENST00000550219 SLC27A1Q6PCB7 646 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 CCDC149Q6ZUS6 474 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 TAS1R1Q7RTX1 841 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 CATSPER3Q86XQ3 398 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 ZBTB8OSQ8IWT0 167 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 ERMNQ8TAM6 284 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 LEO1Q8WVC0 666 aaPredicted RBP14.81□□□□□ -0.04
NUP188-211ENST00000550219 RABGGTAQ92696 567 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 B3GALT6Q96L58 329 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 SCAND2PQ9GZW5 306 aaPredicted RBP14.81□□□□□ -0.04
NUP188-211ENST00000550219 TUFT1Q9NNX1 390 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 CACNG4Q9UBN1 327 aa14.81□□□□□ -0.04
NUP188-211ENST00000550219 ARHGEF35A5YM69 484 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms