RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 CPA5Q8WXQ8 436 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 SH3GL2Q99962 352 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 TRAIPQ9BWF2 469 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 KDM4CQ9H3R0 1056 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 PIK3C2AO00443 1686 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 HNRNPH3P31942 346 aaKnown RBP10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 PPP4CP60510 307 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 SCARA5Q6ZMJ2 495 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 LONP2Q86WA8 852 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 INPP4AQ96PE3 977 aaPredicted RBP10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 SLC4A9Q96Q91 983 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 ZSWIM1Q9BR11 485 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 GPR75-ASB3A0A0A6YYF3 556 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 FAM47DPA6NHR8 397 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 MCF2LO15068 1137 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 ATP6V1G2O95670 118 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 ARSEP51690 589 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 TMPRSS15P98073 1019 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 CEP55Q53EZ4 464 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 DARS2Q6PI48 645 aaKnown RBP10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 RHOT1Q8IXI2 618 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 FBXL13Q8NEE6 735 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 KAT2BQ92831 832 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 ATP6V0A1Q93050 837 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 CFAP36Q96G28 342 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 ROPN1BQ9BZX4 212 aaPredicted RBP10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 TMEM117Q9H0C3 514 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 ROPN1Q9HAT0 212 aaPredicted RBP10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 NPHS2Q9NP85 383 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 AKAP12Q02952 1782 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 TOM1L1O75674 476 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 ARFIP2P53365 341 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 ARL4CP56559 192 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 PTENP60484 403 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 TFAMQ00059 246 aaKnown RBP10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 PDE1BQ01064 536 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 MAP7Q14244 749 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 P3H1Q32P28 736 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 RINT1Q6NUQ1 792 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 NT5DC3Q86UY8 548 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 TTC1Q99614 292 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 TUBB6Q9BUF5 446 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 H0YCG3 227 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 OPLAHO14841 1288 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 SHOX2O60902 331 aaPredicted RBP10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 NDUFB10O96000 172 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 KITP10721 976 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 RARGP13631 454 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 C2CD6Q53TS8 623 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 KCTD6Q8NC69 237 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 SLC17A8Q8NDX2 589 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 SLC20A1Q8WUM9 679 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 MMTAG2Q9BU76 263 aaKnown RBP10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 AGPAT3Q9NRZ7 376 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 HSPBP1Q9NZL4 362 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 SCINQ9Y6U3 715 aa10.88□□□□□ -0.67
SMARCC2-209ENST00000550164 ATRNO75882 1429 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 TARSP26639 723 aaKnown RBP10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 CD302Q8IX05 232 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 MREGQ8N565 214 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 LINC00116Q8NCU8 138 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 FAM161BQ96MY7 647 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 TTC25Q96NG3 672 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 KLF6Q99612 283 aaPredicted RBP10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 CDC42EP4Q9H3Q1 356 aaKnown RBP10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 RIOX1Q9H6W3 641 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 UVRAGQ9P2Y5 699 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 KCNG1Q9UIX4 513 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 ARHGAP23Q9P227 1491 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 NOP56O00567 594 aaKnown RBP10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 P4HBP07237 508 aaKnown RBP10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 TNFRSF8P28908 595 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 QARSP47897 775 aaKnown RBP10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 TTLL12Q14166 644 aaPredicted RBP10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 ITIH4Q14624 930 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 CRYMQ14894 314 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 RBM41Q96IZ5 413 aaKnown RBP10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 UBN1Q9NPG3 1134 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 IQANK1A0A1B0GTG1 560 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 ADAMTS3O15072 1205 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 TBX3O15119 743 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 LMNAP02545 664 aaKnown RBP10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 SHBGP04278 402 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 FECHP22830 423 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 OSTNP61366 133 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 BIRC2Q13490 618 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 MTMR1Q13613 665 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 YTHDF3Q7Z739 585 aaKnown RBP10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 TATDN2Q93075 761 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 MKNK1Q9BUB5 465 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 IFT122Q9HBG6 1241 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 TUFT1Q9NNX1 390 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 USP21Q9UK80 565 aa10.87□□□□□ -0.67
SMARCC2-209ENST00000550164 COPEO14579 308 aa10.86□□□□□ -0.67
SMARCC2-209ENST00000550164 MSH4O15457 936 aa10.86□□□□□ -0.67
SMARCC2-209ENST00000550164 TNNC2P02585 160 aa10.86□□□□□ -0.67
SMARCC2-209ENST00000550164 ARL1P40616 181 aaPredicted RBP10.86□□□□□ -0.67
SMARCC2-209ENST00000550164 CASP5P51878 434 aa10.86□□□□□ -0.67
SMARCC2-209ENST00000550164 EPHA7Q15375 998 aa10.86□□□□□ -0.67
SMARCC2-209ENST00000550164 NXNQ6DKJ4 435 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms